Burkholderia sp. HB1: AC233_01865
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Entry
AC233_01865 CDS
T04094
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
buq
Burkholderia sp. HB1
Pathway
buq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
buq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AC233_01865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
buq03400
]
AC233_01865
DNA repair and recombination proteins [BR:
buq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AC233_01865
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AC233_01865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_23
nSTAND1
BCA_ABC_TP_C
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_21
AAA_22
AAA_25
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
ALE53607
LinkDB
All DBs
Position
1:complement(420785..423658)
Genome browser
AA seq
957 aa
AA seq
DB search
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPDETKLMILAPVVADRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGAAKIYDVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKQHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRASVREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIYEISGWPLRDALGYFQTLRLEGSKREIADKVIKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
STLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARTIEYPDERKDPDERHLRIVEAHGNNLRHVTLDLPVGLLTCVTGVSGSGKSTL
INDTLYQAVAHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEHAYEFFRPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDMGPEGGAGGGQIIAQGTPEQIAKSKASFTGRYLAPLLKRAASKK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctaccacgtcacaagctcgtcgttattaccggtctttccggctcggggaaatcgtcgctc
gcgttcgacacgctctacgcggaaggacagcggcgctacgtcgaaagcctgtcggcctac
gcgcgtcaattcctgcaattgatggaaaagcccgatgtcgatctgatcgagggcctgtcg
ccggccatctcgatcgagcagaaggccacctcgcataatccgcgttcgacggtcggcacc
gtcaccgagattcacgactacctgcggctattgttcgcacgcgtcggcacgccctattgc
ccggaccacgaaatcccgctcgaggcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgccggacgaaacgaagctgatgatcctcgcgccggtcgtggccgaccgcaagggc
gagcacgtcgaactgttcgaggaaatgcaggcgcagggcttcatccgtttccgtgtgcgc
tcgggcggcggcacggccaacgaaggcgccgcgaagatctacgacgtcgactcgctgccg
aagctgaagaagaacgacaagcacaccatcgacgtggtcgtggaccgcctgaaggtgcgt
cccgacatgaagcagcgtctcgcggaatcgttcgaaaccgcgctgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggacacggacaagcagcatctgttcagctccaagttcgcg
tgcccgatctgctcgtattcgcttcaggaactggagccgcggctcttctcgttcaacaat
ccgatgggcgcgtgccccgaatgcgacggcctcggccagattactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcgctcgcggcgggcgcggtgaagggctgggaccgg
cgcaaccagttctacttccagatgctgcaaagcctcgcggcgttctacgatttcgacatc
gacaccgccgtcgaagacctgccggaaaaggtccgcaagatcctgctgttcggctcgggc
aagcaggaaattccgttctcgtacatcaacgagcgcgggcgcgcatcggtccgcgagcat
gtgttcgaaggcatcattccgaatctcgaacggcgttaccgcgaaaccgattcggccgcg
gtgcgcgaggaactcgccaagtaccagaacaatcagccgtgccccgcgtgcgcgggcacg
cggctgcgccgcgaagcgcgcttcgtgcggatcggcgcggacggcgacgcgcgcggcatc
tacgaaatcagcggctggccgttgcgcgatgcgctcggctacttccagacgctgcgcctc
gaaggctcgaagcgcgagatcgccgacaaggtcatcaaggaaatcgtcgcgcggctcatg
ttcctgaacaacgtcgggctcgattatctgtcgctcgaacgcagcgccgaaacgctgtcg
ggcggcgaggcgcagcgcattcgcctcgcgtcgcagatcggctccggcctcaccggcgtg
atgtacgtgctcgacgagccgtccatcggactgcatcagcgcgacaacgaccggctgatc
tccacgctcaagcatctgcgcgatctgggcaactcggtgatcgtggtcgagcacgacgaa
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgcgggcgagcatggc
ggcatggtgatcgccgagggcacgccgaagcaggtgcaggccaatgcggcctccatgacg
gggcagtacatgtccggcgcgcgcaccatcgagtatccggacgaacgcaaggacccggac
gagcggcatctgcgcatcgtcgaggcgcacggcaacaatctgcggcacgtcacgctcgat
ctgccggtcgggctgctgacgtgcgtgaccggcgtatccggctcgggcaaatccacgctc
atcaacgacacgctgtatcaggcggtcgcgcatcacctttacgggtcgtccacggagccc
gcgccgtacgagtcgatcgagggactggagcatttcgacaaggtgatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctccaatccggccacttacacgggcctcttcacgccg
atccgcgaactgttcgcgggcgtccccgccgccaaggagcgcggctacgacccggggcgt
ttctcgttcaacgtgaagggcggccgctgcgagtcctgtcagggcgacggcgtgctgaag
gtcgaaatgcactttctgccggacgtgtacgtgccttgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgacgtgcagtacaaaggcaagaacatcagcgaagtgctcgac
atgaccgtcgagcatgcgtacgagttcttcaggccggtgccggtcgtcgcgcgcaagctg
aaaaccttgctcgacgtgggcctcggctatatccggctggggcagtcggcgaccacgctg
tcgggcggcgaggcgcagcgcgtcaaactatctctggaactgagcaagcgtgataccggt
cgcacgctatacattctcgacgaacccacgaccgggttgcactttcatgacattgcgctg
ctgctggaagttattcatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaactgccgactgggtcatcgacatgggtccggaaggcggcgcg
ggcggcggccagatcatcgcgcaaggcacgcccgagcagatcgcgaagtccaaagcaagt
tttaccggtagatacctggcgcctttgctgaaacgcgcggccagtaaaaagtaa
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