KEGG   Burkholderia sp. HB1: AC233_01865
Entry
AC233_01865       CDS       T04094                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
buq  Burkholderia sp. HB1
Pathway
buq03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:buq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AC233_01865
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:buq03400]
    AC233_01865
DNA repair and recombination proteins [BR:buq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AC233_01865
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AC233_01865
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 AAA_23 nSTAND1 BCA_ABC_TP_C DnaJ_CXXCXGXG RsgA_GTPase nSTAND3 AAA_21 AAA_22 AAA_25 Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: ALE53607
LinkDB
Position
1:complement(420785..423658)
AA seq 957 aa
MEQIRIRGARTHNLKNVNLDLPRHKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLFARVGTPYC
PDHEIPLEAQSVSQMVDAALALPDETKLMILAPVVADRKGEHVELFEEMQAQGFIRFRVR
SGGGTANEGAAKIYDVDSLPKLKKNDKHTIDVVVDRLKVRPDMKQRLAESFETALRLADG
RAIALEMDTDKQHLFSSKFACPICSYSLQELEPRLFSFNNPMGACPECDGLGQITFFDPK
RVVAHPSLSLAAGAVKGWDRRNQFYFQMLQSLAAFYDFDIDTAVEDLPEKVRKILLFGSG
KQEIPFSYINERGRASVREHVFEGIIPNLERRYRETDSAAVREELAKYQNNQPCPACAGT
RLRREARFVRIGADGDARGIYEISGWPLRDALGYFQTLRLEGSKREIADKVIKEIVARLM
FLNNVGLDYLSLERSAETLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
STLKHLRDLGNSVIVVEHDEDMIRMADYVVDMGPGAGEHGGMVIAEGTPKQVQANAASMT
GQYMSGARTIEYPDERKDPDERHLRIVEAHGNNLRHVTLDLPVGLLTCVTGVSGSGKSTL
INDTLYQAVAHHLYGSSTEPAPYESIEGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCESCQGDGVLKVEMHFLPDVYVPCDVCHGKR
YNRETLDVQYKGKNISEVLDMTVEHAYEFFRPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLEVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDMGPEGGAGGGQIIAQGTPEQIAKSKASFTGRYLAPLLKRAASKK
NT seq 2874 nt   +upstreamnt  +downstreamnt
gtggaacaaatccgtattcgtggggctcgcacccacaacctgaagaacgtcaatctcgac
ctaccacgtcacaagctcgtcgttattaccggtctttccggctcggggaaatcgtcgctc
gcgttcgacacgctctacgcggaaggacagcggcgctacgtcgaaagcctgtcggcctac
gcgcgtcaattcctgcaattgatggaaaagcccgatgtcgatctgatcgagggcctgtcg
ccggccatctcgatcgagcagaaggccacctcgcataatccgcgttcgacggtcggcacc
gtcaccgagattcacgactacctgcggctattgttcgcacgcgtcggcacgccctattgc
ccggaccacgaaatcccgctcgaggcgcaaagcgtgtcgcaaatggtcgacgcggcgctc
gcgttgccggacgaaacgaagctgatgatcctcgcgccggtcgtggccgaccgcaagggc
gagcacgtcgaactgttcgaggaaatgcaggcgcagggcttcatccgtttccgtgtgcgc
tcgggcggcggcacggccaacgaaggcgccgcgaagatctacgacgtcgactcgctgccg
aagctgaagaagaacgacaagcacaccatcgacgtggtcgtggaccgcctgaaggtgcgt
cccgacatgaagcagcgtctcgcggaatcgttcgaaaccgcgctgcgtctcgccgacggc
cgcgcgatcgcgctcgaaatggacacggacaagcagcatctgttcagctccaagttcgcg
tgcccgatctgctcgtattcgcttcaggaactggagccgcggctcttctcgttcaacaat
ccgatgggcgcgtgccccgaatgcgacggcctcggccagattactttcttcgatccgaag
cgggtggtcgcgcatccgtcgctgtcgctcgcggcgggcgcggtgaagggctgggaccgg
cgcaaccagttctacttccagatgctgcaaagcctcgcggcgttctacgatttcgacatc
gacaccgccgtcgaagacctgccggaaaaggtccgcaagatcctgctgttcggctcgggc
aagcaggaaattccgttctcgtacatcaacgagcgcgggcgcgcatcggtccgcgagcat
gtgttcgaaggcatcattccgaatctcgaacggcgttaccgcgaaaccgattcggccgcg
gtgcgcgaggaactcgccaagtaccagaacaatcagccgtgccccgcgtgcgcgggcacg
cggctgcgccgcgaagcgcgcttcgtgcggatcggcgcggacggcgacgcgcgcggcatc
tacgaaatcagcggctggccgttgcgcgatgcgctcggctacttccagacgctgcgcctc
gaaggctcgaagcgcgagatcgccgacaaggtcatcaaggaaatcgtcgcgcggctcatg
ttcctgaacaacgtcgggctcgattatctgtcgctcgaacgcagcgccgaaacgctgtcg
ggcggcgaggcgcagcgcattcgcctcgcgtcgcagatcggctccggcctcaccggcgtg
atgtacgtgctcgacgagccgtccatcggactgcatcagcgcgacaacgaccggctgatc
tccacgctcaagcatctgcgcgatctgggcaactcggtgatcgtggtcgagcacgacgaa
gacatgatccgcatggccgactacgtggtcgacatgggtccgggcgcgggcgagcatggc
ggcatggtgatcgccgagggcacgccgaagcaggtgcaggccaatgcggcctccatgacg
gggcagtacatgtccggcgcgcgcaccatcgagtatccggacgaacgcaaggacccggac
gagcggcatctgcgcatcgtcgaggcgcacggcaacaatctgcggcacgtcacgctcgat
ctgccggtcgggctgctgacgtgcgtgaccggcgtatccggctcgggcaaatccacgctc
atcaacgacacgctgtatcaggcggtcgcgcatcacctttacgggtcgtccacggagccc
gcgccgtacgagtcgatcgagggactggagcatttcgacaaggtgatcaacgtcgaccag
tcgccgatcggccgcacgccgcgctccaatccggccacttacacgggcctcttcacgccg
atccgcgaactgttcgcgggcgtccccgccgccaaggagcgcggctacgacccggggcgt
ttctcgttcaacgtgaagggcggccgctgcgagtcctgtcagggcgacggcgtgctgaag
gtcgaaatgcactttctgccggacgtgtacgtgccttgcgacgtctgccacggcaagcgc
tacaaccgcgaaacgctcgacgtgcagtacaaaggcaagaacatcagcgaagtgctcgac
atgaccgtcgagcatgcgtacgagttcttcaggccggtgccggtcgtcgcgcgcaagctg
aaaaccttgctcgacgtgggcctcggctatatccggctggggcagtcggcgaccacgctg
tcgggcggcgaggcgcagcgcgtcaaactatctctggaactgagcaagcgtgataccggt
cgcacgctatacattctcgacgaacccacgaccgggttgcactttcatgacattgcgctg
ctgctggaagttattcatcggttacgcgaccagggtaataccgtcgtgatcatcgagcat
aatctcgatgtaatcaaaactgccgactgggtcatcgacatgggtccggaaggcggcgcg
ggcggcggccagatcatcgcgcaaggcacgcccgagcagatcgcgaagtccaaagcaagt
tttaccggtagatacctggcgcctttgctgaaacgcgcggccagtaaaaagtaa

DBGET integrated database retrieval system