Burkholderia sp. JP2-270: DM992_30230
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Entry
DM992_30230 CDS
T07766
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
burk
Burkholderia sp. JP2-270
Pathway
burk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
burk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DM992_30230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
burk03021
]
DM992_30230
Transcription machinery [BR:
burk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DM992_30230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIND
GerE
Motif
Other DBs
NCBI-ProteinID:
AWV03519
UniProt:
A0A2U9T1Q5
LinkDB
All DBs
Position
2:2674918..2677335
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AA seq
805 aa
AA seq
DB search
MAKTTGGKKATGKGSTEPTKKVTAAKSASSTRTTSSASSAPAGKKTAAGTAQAAPAPAAR
TRAAARPDSGPAKPAAKRASAKSARDTTAAADETAVRTTHAPTVQPAVVQQPRVDIAGTA
NSMTKKLNEVSVDDDANQSDEQPAAAAAPGKSKVRDRRAKEKALLKEAFATSTPGTAEEL
EERRVKLRALIKLGKERGFLTYAEINDHLPDNFTETEALEGIIGTFNDMGVAVYEQAPDA
ETLLLNDNAPAASSDDEVEEEAEVALSTVDSEFGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGLRHMVMAISACPTTIADILAMAERVANEEIRVDELVDGLLDPNASDSADTDG
FSAKEAEAIENEDEEAEEEEEEEEEEDDDGAAQATANAAQLEALKRASLDKFSQISEWFD
KMRRAFEKEGYKSKSYLKAQETIQTELMTIRFTARTVERLCDTLRAQVDEVRQVERQILH
IVVDKCGMPRSEFIARFPGSETDLDWAEKITAEGHSYSAVLSRNIPAIREQQQRLLDLQA
RVVLPLKDLKETNRQMAAGELKARQAKREMTEANLRLVISIAKKYTNRGLQFLDLIQEGN
IGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKMNRISRQ
ILQETGLEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFIEDTNTV
APADAALHASMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVTRERIRQ
IEAKALRKLRHPSRSDKLKSFLEGN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacgacaggcggaaagaaagcaacaggcaagggctcgacggagccgaccaag
aaggtcacagcggccaagtctgcttcttccaccaggacaacgtcttcagcatcgtcagcc
cctgcgggaaagaaaaccgcggccggcactgctcaggctgcgccggcgccggcagccaga
acgcgggctgccgccagacccgactccgggccggccaagccggcggcgaagcgggcaagt
gcgaaaagcgcaagggacacgactgccgccgcggacgaaacggcagtacgtactactcat
gcacccacggttcaaccggctgtcgtccagcagccgcgagtcgatatagccggtacggcg
aactccatgaccaaaaagctgaacgaagtatccgtcgatgacgacgcaaatcagagcgac
gagcagcccgcagccgcggctgcaccgggcaaatccaaggtgcgcgatcgtcgcgccaag
gaaaaggcgctgctgaaggaagcgttcgcgacgagcacgccgggcacggccgaggagctc
gaagagcgccgcgtgaagctgcgcgcgctgatcaagctcggcaaggagcgcggcttcctt
acgtacgccgaaatcaacgatcacctgccggacaacttcaccgagacggaagccctcgaa
ggcatcatcggcacgttcaacgacatgggcgtggcggtctacgagcaggcgccggacgcg
gaaacgctgctcctgaacgacaacgcgccggccgcgtcgtcggacgatgaagtcgaagag
gaagcggaagtcgcgctgtccaccgtcgattcggagttcggccgcacgaccgatccggtc
cggatgtacatgcgcgaaatgggcacggtcgagctgctcacgcgcgaaggcgaaatcgag
atcgcgaagcggatcgaggacggcctgcgccacatggtgatggcgatttccgcgtgcccg
acgacgatcgccgacattctcgcgatggccgagcgcgtcgcgaacgaagagatccgcgtc
gacgagctcgtcgacggcctgctcgatccgaacgcgtcggacagcgccgacacggacggc
ttctccgcgaaggaagcggaagccatcgagaacgaggacgaggaagccgaagaggaagag
gaagaagaggaagaggaggacgatgacggcgccgcgcaggcgacggccaacgccgcccag
ctcgaagccctcaagcgcgcatcgctcgacaagttctcgcagatcagcgagtggttcgac
aagatgcgccgcgcgttcgagaaggaaggctacaagtcgaagtcctacctgaaggcgcag
gaaacgatccagaccgagctgatgacgatccgcttcaccgcgcgtaccgtcgagcgcctg
tgcgacacgctgcgtgcgcaggtggacgaagtgcgtcaggtcgagcgccagatcctgcac
atcgtcgtcgacaagtgcggcatgccgcgttcggaattcatcgcgcgcttcccgggcagc
gagacggatctcgactgggccgagaagatcacggccgagggccattcgtacagcgcggtc
ctgtcgcgcaacatcccggcgatccgcgaacagcagcagcgcctgctcgacctgcaggcg
cgcgtcgtgctgccgctgaaggacctgaaggaaaccaaccgccagatggcggctggcgaa
ctgaaggcacgccaggcgaagcgcgaaatgaccgaggccaacctgcgtctcgtgatctcg
atcgcgaagaagtacacgaaccgcggcctgcagttcctcgacctgatccaggaaggcaac
atcggcctgatgaaggcggtggacaagttcgaataccgtcgcggctacaagttctcgacc
tatgcgacgtggtggatccgtcaggccatcacgcgctcgatcgccgatcaggcgcgcacg
atccgtattccggttcacatgatcgagacgatcaacaagatgaaccgcatctcgcggcag
atcctgcaggaaaccggtctcgagccggatccggcaacgcttgccgagaagatggaaatg
ccggaagacaagatccgcaagatcatgaagatcgcgaaggagccgatctcgatggaaacg
ccgatcggtgacgacgacgattcccatctcggcgacttcatcgaggacaccaacacggtc
gcgccggcggatgccgcgctgcatgcaagcatgcgcgacgtcgtgaaggacgtgctcgat
tcgctgacgccgcgcgaggcgaaggtgctgcggatgcgcttcggcatcgaaatgagcacg
gaccacacgctcgaggaagtcggcaagcagttcgacgtcacgcgcgagcggatccgtcag
atcgaggccaaggcgctgcgcaagctgcgtcatccgagccgttccgacaagctgaagtcg
ttcctcgaagggaactga
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