Paraburkholderia phytofirmans OLGA172: AYM40_22420
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Entry
AYM40_22420 CDS
T05111
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
buz
Paraburkholderia phytofirmans OLGA172
Pathway
buz03030
DNA replication
buz03410
Base excision repair
buz03420
Nucleotide excision repair
buz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
buz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AYM40_22420
03410 Base excision repair
AYM40_22420
03420 Nucleotide excision repair
AYM40_22420
03440 Homologous recombination
AYM40_22420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
buz03032
]
AYM40_22420
03400 DNA repair and recombination proteins [BR:
buz03400
]
AYM40_22420
Enzymes [BR:
buz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AYM40_22420
DNA replication proteins [BR:
buz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AYM40_22420
DNA repair and recombination proteins [BR:
buz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AYM40_22420
NER (nucleotide excision repair)
GGR (global genome repair) factors
AYM40_22420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
ANB75173
UniProt:
A0A167W9Y5
LinkDB
All DBs
Position
2:470467..473208
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AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPEGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYADYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIEGVEADDV
IGTLSTEAEKRGMKVIVSTGDKDLAQLVSDHVTLINTMTNEKLDREGVIAKFGVPPERII
DYLSLIGDTVDNVPGVEKCGPKTAIKWLTQYETLDGIVAHADEIKGAVGDNLRRALDFLP
MAKKLVTVERQCDLTGHIVSIEEGLESRPESREELRDVFTRNGFKTWLREVEVAEAVEGP
ETDVPPALTVDHERHYDTVQTWEQFDAWLEKINAAELTAFDTETTSLDPMTAQIVGLSLS
VEPGYAAYVPVAHRGPDAPVQLPRDEVLAKLKPWLESAEHKKVGQHMKYDEQVLANYGIE
MRGVEHDTLLESYVLESHRTHDMDSLALRHLGIKTIKYEEVAGKGASQIGFDEVALDKAA
EYAAEDADITLRLHQALYPQVAAEKTLDYVYRDIEMPTSRVLRKMERTGVLIDAEKLRAQ
SSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQ
KLAEDYPLPKILLEHRGLSKLKSTYTDKLPRMVDAQTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPPGHKLVSADYSQIELRIMAHISGDESLLRAFSQGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSAFGLAANLGITRDAAKLYIDRYFARY
PGVARYMDETRLSAKAKGYVETAFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEESKVGTRMIMQVHDELILEVPDAELSDVRKRLPELMCGVAALKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtagacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcggacccgagggtggtccgacgggt
gcgctctatggaatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgttccgcgacgactggtatgccgactat
aaggcgaaccgcccgtcgatgccggacgatctctcgcgtcagatcgagccgatccacgtc
gccgtgcgcgcgctcggctggccgcttctgatgatcgaaggcgtcgaagccgacgacgtg
atcggtacgctcagcaccgaggcggaaaaacgcggcatgaaagtgatcgtgtcgactggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgactaac
gagaagctcgaccgcgaaggcgtgatcgccaaattcggcgtgccgccggagcgcattatc
gattacctgtcgttgatcggcgataccgtcgacaacgtgcccggcgtcgaaaaatgcggg
ccgaaaacggcgatcaaatggctgacgcagtacgaaaccctcgatggcatcgtcgcacat
gcggacgagatcaaaggtgcggtaggagacaatctgcgacgtgcgctcgattttctgcca
atggcgaagaagctcgtcaccgtcgagcgccaatgcgatctgaccggccatatcgtgtcg
atcgaagaaggcctggaaagccggccggaatcgcgcgaggagctgcgcgacgtgttcacg
cgcaacggcttcaagacctggctacgtgaggtggaagtcgcggaagccgtggaaggtccc
gagaccgacgtgccgccggcgctcaccgtggatcacgagcgtcattacgataccgtgcag
acctgggagcagttcgacgcctggcttgagaaaatcaacgccgccgagctgactgcgttc
gataccgaaaccacctcgctcgatccgatgaccgcgcaaatcgtggggctgtcgttgtcg
gtcgagcctggttacgctgcttatgtgccggttgcgcatcgcggtccggacgcgcccgtg
caactgccgcgcgacgaagtcctcgcgaagctcaagccgtggctggaaagcgccgaacac
aagaaggtcggccagcacatgaagtacgacgaacaggtgctggcgaactacggcatcgaa
atgcgcggcgtcgaacacgacacgctgctggaatcgtacgtgctcgaatcgcaccgtacg
cacgacatggacagcctcgcgctgcgccatctcggcatcaagacgatcaagtatgaagag
gtggcgggtaaaggcgcgtcgcagatcggcttcgacgaagtcgcgctggacaaggctgcc
gagtatgcggcggaagacgccgacatcactttgcgtctgcatcaggccttgtatccgcaa
gtggccgcggagaagacgctcgactacgtgtatcgcgacatcgaaatgccgacctcgcgc
gtcttgcgcaagatggagcgcaccggcgtgctgatcgacgccgaaaagctgcgcgcgcaa
agcagtgaaatcgccacgcgtctgattcagctggaaagcgaagcgtatgtgctggctggt
ggcgaattcaatcttggttcaccgaagcagattggtcagattttcttcgagaagctcgaa
ttgccggtggtcaagaagaccccgagcggcgcgccgtccaccgacgaagaagtgctgcaa
aagctcgccgaagactatccgttgccgaagatcctgctggaacaccgcgggttgtcgaag
ctgaaatcgacctacactgacaagctgccgcgcatggtcgacgcccaaactggccgcgta
catacgaactacgcgcaggcggtggcggtcacgggccggctggcgtcgaacgatccgaac
ctgcagaacattcccgtgcgtaccggcgaagggcgtcgtatccgcgaggcgtttatcgcg
ccgccgggccacaagctcgtctccgcggactactcgcagatcgaattgcgcatcatggcg
cacatttccggcgacgaatccctgctgcgggcgttctcgcagggcgaagacattcaccgc
gccactgcagcggagattttcagcgtgacgccgctcgaagtgtcgaacgatcaacggcgc
gtagcaaaggtcatcaacttcggtctgatctacggcatgagcgcgttcggtcttgccgcg
aacctcggcattacgcgcgacgcggccaagctgtatatcgaccgctacttcgcgcgctat
ccgggcgtcgcgcgttatatggacgaaacgcgtctgagcgcgaaggccaaaggctacgtg
gaaaccgcgtttgggcgccgcctgtggctgccggagatcaacggtggtaacggtccgcgc
cgtcaggccgccgagcgcgcggccattaacgcgccgatgcaaggcacggctgccgacctg
atcaagctgtcgatgatcgcggtgcagaaatggatcgaagagtcgaaggtcggtacgcgc
atgatcatgcaggtgcacgacgaactgattctcgaagtgcccgacgcggaattgtccgac
gtacgtaagcgcttgccggaactgatgtgcggtgtcgccgcgctgaaagtgccgctggtc
gccgaagtaggcgccggcctgaactgggaagaagcgcattga
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