Bombus vancouverensis nearcticus: 117156163
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Entry
117156163 CDS
T07628
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
bvan
Bombus vancouverensis nearcticus
Pathway
bvan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bvan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117156163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bvan03019
]
117156163
Messenger RNA biogenesis [BR:
bvan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117156163
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
TSX
Motif
Other DBs
NCBI-GeneID:
117156163
NCBI-ProteinID:
XP_033188849
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MADENEDQWLYGDSTDGKEYTPTSAQPESQENDSLPATIQEKSEPLEDQKTENVPDAPTE
TPEETEPQEEESSRADNVQNENNTEVNKNGVREVSSQEDGEAASDSDSDDDVHVVIGDIK
STPAYGSLNIKRGGLLTNASGVPDKLNKQPGKFSIDEFETIGVINGMPAHEFNLDQLEDK
PWRQPGADITDYFNYGFNEETWRAYCERQKRMRSESGVGLILNAGGGGGNAGSMRVPQVA
ITNDNSKYSGIMGPKRAGPPPGRKMAGTIDVIGSSGLASRRNLDKSPPKGNVIQVMTADR
REYSRKPGYPDMSVPPPGAGMPPAFDIPPPGYPGEPAPFYIPETDPYYQSYEPTQDNQWG
NDPTWQPTNLAIPMTEGEDDKDTGPKTIPTMVPPTNIPPIMPPRDSRDRERDRERERDRD
RELDSMGRDRERDKDRDRDREREKDSMIRERDRERDSMSRDEERDRDRSRSQYRHKDRHR
HRSRSRSRRHKSRSRSPSRRKKKSRRSERERSKEESE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgaaaatgaggatcaatggttgtatggagattcgactgacggaaaagaatac
acaccaacgtctgctcaaccagaaagccaagaaaatgattcgctccctgctacgatacaa
gaaaagtcagaacccttggaagatcaaaaaacagaaaatgttcctgatgcaccaacagag
acgcctgaagaaacagaaccacaggaggaagagtcttctcgagccgataacgttcagaac
gaaaacaatacagaagtgaacaaaaatggtgtaagagaagtttccagtcaagaagatggt
gaagccgctagtgattcggattccgatgacgacgtacacgttgtcataggtgacattaaa
tcgaccccggcatatggtagcctcaatatcaaaagaggaggattactcacaaatgcatcg
ggagtaccagataaattgaataagcaacctggaaaatttagtatagatgaatttgaaact
ataggcgttatcaatggaatgcctgctcatgagtttaatttagatcaattagaagacaaa
ccttggaggcaacctggtgcagacattactgattactttaattatggctttaatgaagaa
acatggagagcttattgcgaaagacaaaagagaatgagaagtgagtctggagtaggctta
atattgaatgcaggaggaggcggtggtaatgcaggcagcatgagggtacctcaagttgca
attactaatgataacagtaaatattctggtataatggggccaaaaagagcaggtccgcct
ccaggaagaaaaatggcagggacaatagatgtaattggtagttcaggtttggcttccaga
agaaatcttgataaatctccgccaaaaggaaatgtgatacaagtaatgactgcagatagg
agagagtactctaggaagccaggttatcctgatatgagtgtgccacctccaggagcagga
atgcctcctgcatttgatatacctcctcctggataccctggagagccagctcctttttat
atcccagaaacagatccatattatcaaagctatgagcctacacaagataatcaatggggc
aatgatccgacatggcaaccgacaaatttagctattccaatgacagagggagaagatgat
aaagatactggcccaaaaacgataccaactatggttcctcctacaaatattcctcctata
atgccacctagagattctcgagatcgtgaaagagatcgagaacgagaaagagatcgcgac
agagaactagattcgatgggacgggacagagaaagagataaggatagagatcgcgatcgt
gagcgtgaaaaggattctatgattagagaacgagacagagaaagagactcgatgtcgcga
gatgaagaaagagatcgtgacagatctcgatctcagtatcgacacaaagaccgacatcga
catcgatccagatcgcgatctcgtagacacaaatcgaggtccagaagcccaagtcggcgt
aagaagaaatctagacgctctgaaagagaacgttccaaagaagagagcgaataa
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