Beta vulgaris (sugar beet): 104885117
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Entry
104885117 CDS
T03548
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104885117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bvg04040
]
104885117
Ion channels [BR:
bvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104885117
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104885117
NCBI-ProteinID:
XP_010668155
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Position
1:complement(3523772..3531017)
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AA seq
726 aa
AA seq
DB search
MSGSLELSEFMNDNRNKVVRFEDRRSEGSTSSDQPLYPTGRSSPSSDNRVSFGSTFNFIR
RGFEQGLQRIRTLAGSLSFQALSYQSARKPVPQDNILDPQGPFLQKWNKIFLISCFFAMA
WDPLFFYIPVIDGKEKCLKLDGRLEIIACILRTFTDLFYLLHIIFQFRTGFVSPSTRVLG
RGEIIKDHVAIARRYLSSYFIVDILAVLPFPQMSVLVIMPKLMNGGPLTSKGLLKLVIFA
QYVPRLFRIYPLYKEVTRASGIITETAWAGAAFNLFLYMLASHVAGAAWYLFAVDRQIKC
WHRSCIDCDHLSLYCKIKEKHEENYKFNISYCTLTNPDEITDSTVFNFGLFYDALKSEVI
QSTNFLRKLSYCFWWGLRNLSSLGQGLETSTFIGEILFATFICIAGLVLFSLLIGNMQKY
LQSTTVREEQMRIRSQDAEQWMSHRLLPEDMKKRIRRYEQYNWQETRGVDEESVIRNLPR
DLRRDIKRHLCLSLLMKVPMFAIMDEQLKDAMCDRLKPVLYTETSFIVREGDPVNEMLFI
MRGSLLTMTTNGGRTNFFNSGSLKAGDFCGEELLTWALDPHSSSNLPISTSTVQTQTEVE
AFALMSDDLKLVASQFRRLHSKQLRHTFRFFSQHWKRWAACFIQAAWRRYCRRKVEKSLQ
EAEELAMSKEGGSSPSFGATIYASKFAANALRNLRRNIPQNARVPPRSPLLNLQKPTEPD
FTSEDG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagcttggagctttctgaatttatgaacgacaatagaaacaaagttgtaaga
tttgaggaccgaaggtcagagggatctacaagttcagaccaaccattgtatcctactgga
aggtcgtcaccatcatcagataatagagtgtcatttggctcaaccttcaattttatccgt
cgaggatttgagcaaggtttgcaaagaattaggaccttggcaggatctctgagctttcag
gcactctcttaccaatctgcaaggaagcctgtacctcaggataatattcttgatcctcaa
ggaccgtttctgcagaaatggaataagatatttctgatatcatgttttttcgcaatggcc
tgggatccattgttcttctacatcccagttatcgatggcaaagagaaatgcctcaagttg
gatggcagattagaaatcatcgcttgtattcttcgcacgttcaccgacttgttctatcta
cttcatatcatctttcagttccgtacggggtttgtctctccttctactcgagtgcttgga
agaggtgaaataataaaggaccatgttgctatagctagaagatatctctcatcatacttt
attgtggacatcctagccgtgctgccctttcctcagatgtcagttttagttattatgcca
aagttgatgaatggtggtcctttgacttcaaaaggcttgttgaaactagtgatattcgcc
caatacgtcccacgcctctttcggatttatcctttatacaaggaagtaacacgggcatca
ggcataatcaccgaaacagcatgggccggagctgctttcaatctgtttctttatatgcta
gccagccacgtggctggagcagcttggtatttgtttgctgtggatcgacaaatcaagtgt
tggcacagatcttgtatagattgtgatcatttgtctttgtattgcaaaatcaaagaaaag
catgaagaaaattacaaattcaacatttcttactgcactcttacaaacccagatgagatt
acagattctactgtatttaactttggtttgttctacgatgctcttaaatcagaagtgata
cagtccactaattttctaaggaaactctcctactgtttttggtggggacttcgaaatctt
agctctcttggacagggtcttgaaacaagtactttcattggggagatcttatttgccacc
ttcatttgtattgctgggctggttctgttttcgttgcttattgggaatatgcagaaatat
ctacaatcaacgactgttagggaagagcagatgagaataagaagtcaagatgcagagcag
tggatgtcccatcgtttgcttccagaggacatgaaaaaaaggatccgaaggtatgagcaa
tacaattggcaagaaacaagaggtgttgatgaagagagtgtgattcgaaatcttcctagg
gaccttagaagggacattaagaggcatctctgcttgtctcttttgatgaaggtgccgatg
tttgcaataatggatgagcaactgaaagatgcaatgtgtgatcgtctgaaaccggtgcta
tataccgagaccagcttcattgtacgcgagggtgatcctgttaacgagatgctctttata
atgagaggaagtctattgacaatgaccactaatggtggaagaactaatttcttcaattca
ggttccctcaaagctggtgacttctgtggagaagagttgcttacatgggccctagatcca
cactcttcttccaatcttcccatttcaactagcactgtacaaactcagacagaagttgaa
gcttttgctttaatgtctgatgatctgaagcttgtggcatcacaatttcgaaggcttcac
agcaagcagctccgccacacctttaggtttttctcacaacattggaaaagatgggcagcc
tgtttcatacaggcagcatggcgacggtactgcagaaggaaggttgagaaatctttacaa
gaggctgaagaattggctatgtcaaaggagggtggaagctcaccaagttttggtgccacc
atttatgcgtcaaaatttgctgccaatgcacttcgtaatcttcgacgtaatattccccaa
aatgccagagttcctccaaggtcacccctccttaacctacagaagccaactgagcctgat
ttcacttcagaagatggttag
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