Beta vulgaris (sugar beet): 104887156
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Entry
104887156 CDS
T03548
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
bvg
Beta vulgaris (sugar beet)
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104887156
Enzymes [BR:
bvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104887156
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104887156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
PHD
zf-RING_UBOX
zf-C3HC4
zf-RING_2
PHD_5
zf-C3HC4_2
RlmA_N
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
104887156
NCBI-ProteinID:
XP_010670056
LinkDB
All DBs
Position
2:27746739..27768680
Genome browser
AA seq
1654 aa
AA seq
DB search
MGRIKKKPRRSVGVFENGTTSNSAENSAKFDDGNIQNTPFFVDVDRRSWDLMEHRDISEI
VLSNLNLSSEFFGSELNDEYCLRIRLCNVNQHVGRIKLGRWPILSSENIHLEFVKTRAGG
EIGDFDVIVSGQFDGSDDGVSGLAHLVSLKFLTLRPIFGVKLSEDVSSLRIRVEMLQSVF
DACESLIDSTRQVWKKSMMSVMDWLRPELTTSEARYGVCLLSEMEKDSDSEVDNCSFEGS
KFDVGRFYEAIKRSKDCPMLDADLPDLLPELRPYQLRAAYWMVQREKCALQDSAVWEHSL
SYSPLSVAVDILDSRSKVFYNPFSGNVSLSQEIPSSYVIGGILADEMGLGKTVELLACIY
AHPKSSSECGSSSASISDGTETEKIRLKRLKRERVECVCGALSESYKYEGLWVQCDVCDA
WQHGDCVGFSPSKGKRRAKEASKEQHNNNKRKKNDPDVVMMNDEHVCQICSQLIQATRSP
VESGATLIICPAPILPQWHSEILRHTRPGSLRICIYEGVREVSLLNSAAMDINELVSADI
VLTTYDVLRDDLSHDSERHEGDRRLMRYGKRYPVVPTLLTRVFWWRICLDEAQMVENNVA
AAAEMASRLHAKQRWCVTGTPIQRKLDDLYGLLRFLKAAPFDVFRWWAEVIREPYERKDV
AAMAFTHQLFRQLMWRSSKSHVADELELPPQEEQISWLSFSAVEEHFYQRQHETCVDFAR
EILVRFKREIWNKDCSGALSSESDPFITHLEATKLLNSLLKLRQACCHPQVGGSGLRSLQ
RSPMTMDEILYVLISKTKVEGEEALRKVISSLNGLAGIAIIRGELSNATSLYNEALALAA
EHSDDFRLDPLLNLHINHNLSEILKSASNILEQVSFCGGQLNEIPEEKSSEMSAITACHD
HMKNQKVIGDNYFERAVNTDKTTDLNCNVSTDVSKGGKLCDTEPHAPLVSSLESLTDICE
AISRKYLSGFYIRLSQAQQEFQKSYMQVCSSLNDRENKNRVWWLGALQQIEQNKEAADEL
SQKIENAVLANQNISKASKTSSRFQSINALKYSIQSGLDSLEASRRRLLDQLLEVDQTME
KPRDEDVERVRYCPNCYVNVDGRLCVHCEMDELFQAYEARLFLRKGNNGGVISCAEEAVD
LQKKRLERNHFYWNLEQKSKNHGSTSVEIEGRSKRDSGKMFMDSRFPSELEIILGVLRSY
FKAHLGTDGVSAANRHLVILEGMRKEYAHARLLATAQAQVLRAYDEIKMATSRLRLKDNN
DDNSIDALSLEELDVASVENSSEKFVSLAALARIRGKLRYLQGLVISKQKTESNNKVAAS
LDSHPSENANSIKVGEEICPVCQEALQKQKMVFQCGHITCCKCLLAITERKAALNGKVRD
NWILCPTCRQHSDLRSIAFADDSQNKSLVERSENFEASVFVQGSYGTKIEAITRRILSIK
SSDPKAKVLVFSSWNDVLDVLEHAFAANEISYVRMKGGRKSSQAAITIFKGEKITEKGGG
SKINDRQKPESKFIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAISRVHRVGQ
TRRTLVHRFLVKDTVEESIYKLNKSRDASSYISGNKKNQDQPILTLKDVESLFSVAAPPA
AADSNNEQTGSLTHLPPSVAAAVAAERRLGQSRM
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggattaaaaagaaacctcggcgctctgtgggagtgtttgaaaatggaaccact
agcaattctgctgaaaattcagctaaatttgatgatggtaatattcaaaatactcccttt
tttgttgatgttgataggagaagttgggatttaatggaacatagagatatatctgaaatt
gtacttagtaatttaaatttaagttcagaattttttgggtctgaattaaatgatgaatat
tgtttaaggattagattatgtaatgttaatcaacatgtgggtcgaataaagttggggcgt
tggccaattttatcatctgaaaatatacatttggaatttgtgaaaactagggcaggtggt
gaaattggtgattttgatgtgattgttagtggacagtttgatgggagtgatgatggagtt
tctgggttagctcatttggttagtttgaagtttttgacgttgaggccaattttcggggtt
aaattatctgaggatgtttcttcacttagaattagggtggagatgcttcagagtgtgttt
gatgcttgtgaatcacttatagatagcactaggcaggtatggaagaagagcatgatgagt
gtaatggattggcttcggcctgagttgacgacgtctgaggctaggtatggggtctgttta
ttgagtgaaatggaaaaggattccgattcagaggttgataattgcagctttgaaggttca
aagttcgacgttggtagattttatgaagccattaagcgatcaaaagattgcccgatgctg
gatgctgatttgcctgatttgctccctgagcttagaccatatcagcttcgggctgcttat
tggatggtacaaagggagaagtgtgctttgcaggattcggctgtgtgggaacacagtcta
tcttattctcctttgtctgtggctgtggatattctggactctcgttcaaaagtgttttac
aatccatttagtgggaacgtttcgttgtctcaagagatcccctcttcatatgtcatcggc
ggtattcttgctgatgagatgggcttggggaaaactgttgaacttcttgcatgtatatac
gctcatcctaagtcatcatctgaatgcggcagttcttctgcaagtatatcagatggtaca
gagacagagaaaatcaggctgaaaaggctgaagagagagcgggtggaatgcgtatgtggt
gcactgagtgaaagttacaaatatgaaggattgtgggttcagtgtgatgtatgtgatgca
tggcagcatggagattgtgttggtttttctccttctaaaggaaaacgaagagctaaggag
gcttcgaaggaacagcacaacaataacaaaaggaagaaaaatgatccggacgttgtcatg
atgaatgatgaacatgtctgtcaaatttgctcgcagttgatccaagctactaggtctccg
gttgagtctggagctacccttattatatgtcctgctccaatattgcctcagtggcattct
gaaatacttcgtcatacaagaccaggttccttgagaatttgtatctatgaaggtgtgaga
gaagtttctctattgaattccgctgcaatggatatcaacgaacttgtctctgctgacatt
gtgttgacgacatatgatgtactgagagatgatctgtctcatgattcagagaggcatgaa
ggggatcgccgcttgatgagatacggaaaaaggtatcctgtggttccaacccttctgacc
agagtcttttggtggagaatttgcttagatgaagctcaaatggtggagaataatgttgct
gccgcagcagagatggcctcgcgtctacatgcaaaacagcgctggtgtgttacaggaact
ccgatccagaggaagttggatgatttatatggtcttctcagattccttaaagcggctcca
tttgatgtgtttaggtggtgggctgaagttattcgagaaccatatgagcggaaggatgta
gcagctatggcattcacacatcagttattcagacaactgatgtggcgttcctcaaagtca
cacgtggcagatgagcttgagcttcctccacaggaagaacaaatctcctggctttctttc
tctgcagttgaagaacacttctaccaaaggcaacatgaaacttgtgtggattttgctcgc
gaaattcttgtaaggttcaaaagggagatttggaataaagattgctcaggagccttgtca
tctgaatctgatccttttattacccatttggaggctacgaagttgctaaattcacttctg
aagcttcgtcaagcatgctgccaccctcaagtgggaggatctggattgcgttctctccaa
cggtcccccatgaccatggatgaaatattatatgttcttataagtaaaaccaaggtggag
ggagaggaagcattaaggaaagtaatttcttcattgaatggactagcgggtatagcaatc
atccgaggcgaattatctaatgctacatcattgtataatgaggcattagctttagctgca
gaacattctgatgatttccgtctggaccctttgttaaatcttcatataaatcacaatctt
tctgagattctcaaatcagcctcaaacatcttggaacaagtatcattttgtgggggacag
ctaaatgaaatccctgaagagaagtcttctgaaatgagtgccatcactgcatgtcatgat
cacatgaagaatcaaaaagttattggagataattacttcgagagggctgttaatactgac
aaaaccactgacttaaactgcaatgtttcaacagatgtctcaaaaggtggtaaattatgt
gatacagagccccatgcaccacttgtctcaagtcttgaaagcttgactgatatatgtgag
gctataagccggaaatacttatctggattctatataaggttgtcacaagctcaacaggag
ttccagaagtcatatatgcaggtctgcagttctttaaacgatagagagaacaaaaacaga
gtctggtggctgggagccctccaacaaattgaacagaataaagaagcagctgacgagttg
tcacagaagattgaaaatgcagttttagccaaccaaaacatttcaaaagcatcaaaaaca
tcgtcccgttttcagagtataaatgcactcaagtattctatccaaagtggtttggactca
ctggaagcttctcgaagaaggttattagatcagctgctggaagttgatcaaacaatggaa
aaaccaagagatgaagatgttgaacgtgtacgatactgtccaaattgctatgtgaatgtg
gatggtcgtttgtgtgttcactgtgaaatggatgagttattccaggcttacgaggctagg
ctctttctcagaaaagggaacaatggaggagttatctcgtgtgctgaggaggctgtagat
ttacaaaaaaaaagattggagaggaatcatttttactggaatctggaacaaaagtcaaaa
aatcatggatcaactagtgtagaaattgaaggcagaagcaaaagggattctgggaaaatg
ttcatggattcgagattcccctccgagctggaaataatccttggtgttttaaggagttat
tttaaggcacatttaggaacagacggtgtatcagcagctaacagacacctggtcattctc
gagggaatgaggaaggaatatgctcatgcaagattgttggctactgctcaagctcaggtt
cttcgcgcatatgatgaaattaagatggcaacttcaagattacgcttaaaagataataat
gatgataattctattgatgctctaagcctagaagaacttgatgttgctagcgtggagaat
tcaagtgaaaaatttgtgtcattggcagcattagcacgaataagaggaaaacttcggtat
ttgcagggactggtaatttctaaacagaaaacagagtcaaataacaaggtagctgcttcg
ctagattctcatccttcagagaatgcaaacagtatcaaagtgggtgaagagatttgtcct
gtatgtcaagaagctcttcaaaaacaaaaaatggtgtttcaatgtggacatataacctgc
tgcaaatgtttacttgcaataactgagcgaaaggcggctcttaatggcaaggtgcgagat
aattggattttatgcccgacttgccgacaacattctgatttgaggagtattgcctttgct
gatgatagccagaataaatccttggttgaaaggagtgaaaattttgaggcttctgtgttt
gtccagggatcctatggtacaaagattgaagcaattacaagaagaatcctgtcgataaag
tcaagtgacccaaaggctaaagttcttgtcttctccagttggaatgacgtccttgatgtg
ttggagcatgcttttgctgctaatgagattagttatgttcgtatgaaaggaggaagaaaa
agttcacaagctgcaataaccatttttaaaggagaaaagattacagaaaagggtggtggt
agcaagataaatgaccgacaaaagccggagtctaaatttatccaagtgttactcctctta
gttcaacatggagcaaatggtcttaacctccttgaagcacagcatgtcattcttgtcgag
cccctactgaatccagcagctgaagcgcaagctatcagcagagtgcaccgagttgggcag
actcgtagaacacttgttcataggttcttagttaaggatacagttgaagaaagcatatac
aaactgaataaaagtagagatgccagttcttatatcagtgggaataagaagaatcaagac
caaccaattttaacactgaaagacgtcgagtcgttattttcagtagcagcacctcctgca
gcagcagatagtaataatgagcaaaccgggagtttaacacatttaccaccttctgtggct
gctgccgtggcggctgagagaaggcttggccaatctagaatgtaa
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integrated database retrieval system
