Beta vulgaris (sugar beet): 104887291
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Entry
104887291 CDS
T03548
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
bvg
Beta vulgaris (sugar beet)
Pathway
bvg04120
Ubiquitin mediated proteolysis
bvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104887291
04120 Ubiquitin mediated proteolysis
104887291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bvg04121
]
104887291
Enzymes [BR:
bvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104887291
Ubiquitin system [BR:
bvg04121
]
Ubiquitin ligases (E3)
U-box type E3
104887291
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Cas_DxTHG
Motif
Other DBs
NCBI-GeneID:
104887291
NCBI-ProteinID:
XP_010670206
LinkDB
All DBs
Position
2:32488171..32504955
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AA seq
1044 aa
AA seq
DB search
MATPKPQRSPAQIEDIILRKIFLVSLVDSTESDSRVVYLELTAAEILSEGRELLLSRDLM
ERVLIDRLSNQFPNSEAPFSYLVGCFRRAYDEGKKIMNMKDKNLRSEMELVVKQSKKLAV
SYCRIHLGNPDMFPGVDATDVNVGVNPLGKKPSPLLSLIYSEVGGAVIDSYGGGGSSSSG
LTSPPGFLDEFFGEGDFDSLDPVFKFLYDNLREKVVRESALGNFQQPLRALLYLVNFPAG
AKSLVTHKWWMPPGSFLNGRAMEVASILGPFFHISALPDTALFKSQPDVGQQCFSEASTR
RPADLLSSFTTIKTVMNGLYDGLHEVLLCLLKKSDTRESVLEFLAAVINNNSSRAHLQID
PLTCASSGMFVNLSAVMLRLCEPFLDAKLSKRDKIDPSYVFYSNRLDLRALTALHASSEE
VSEYISELNNGRLDDSTDNNVPDNRLLTSLEATGSGNNSGGPSVQSVQNVRYPFICECFF
MTARVLNLGVLKAFSDFKHLVQDISRSEDSLATSKAMLEQAPTRQLELDIARLEKEIESF
SQEKLCYEAQILRDGGLIQQALSFCRLMVVWLVGLVGGFKLPLRLPCPMAFACMPEHFVE
DAIELLIFASRIPKALDGVELDDFMNFIIMFMASPEYVRNPYLRAKMVEVLNCWMPRRSG
SSATASLFEGHQLSLQYLVKNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPS
HRNVWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKALEAEMSNTVEWEQRPA
QERQERTRLFHSQENIIRIDMKLANEDVSLLAFTSEQITSPFLLPEMVERVASMLNYFLL
QLVGPQRKSLSLKDPEKYEFRPKHLLKQIVNVYVHLARGDKGNVFPAAISRDGRSYNEQL
FSAAADVLMRIGEDGRIIQEFVELGAKAKAAAVEAMDAENALGDIPDEFLDPIQYTLMKD
PVILPSSRVILDRPVILRHLLSDSTDPFNRSPLTPDMLIPDHELKSKIEEFVRSHSTRNL
DDGINATSAKGTIQTPTTEMQLID
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccaaaaccacaacgatcgccagcacaaatcgaagacataattctccgaaag
attttcctcgtatctctcgttgattcaacggaatccgattctcgcgtagtttatctcgaa
ttaacagctgctgaaattctcagcgaaggtagggaattgctgctttctagggatttgatg
gaaagggttttaattgatcggctttcgaatcagttccccaattccgaggcaccgttttct
tatctagtaggttgttttcgacgtgcttatgatgaagggaagaagattatgaacatgaaa
gataagaatttaaggtctgaaatggagttggttgttaagcaatcgaagaaattggcggtt
tcgtattgccggattcatttaggtaatcctgatatgtttcctggtgtggatgctactgat
gttaatgtcggtgttaatccgttggggaagaagccgtcaccgttgttgtcgttgatttat
tctgaggttggaggcgcggttattgatagctatggagggggtggaagtagtagtagtggg
ttaacaagcccacctgggttcttggatgaattctttggggagggagatttcgatagtttg
gacccggtttttaagtttttgtatgataatttaagggagaaagtggtgagggaatcagca
ttggggaattttcagcagccattgagggctttgttgtatctggttaatttcccagctggg
gcaaagtctttagttactcataaatggtggatgccaccgggttcgttcctgaatggtcgc
gctatggaggttgctagcattttgggtcccttctttcatatcagtgcattgcctgatact
gcccttttcaagagccaacctgatgttggtcagcagtgtttctctgaagcatcaacccgt
cgtccagctgatctactatcatcattcactaccataaagaccgtgatgaatggcttatat
gatggtttacacgaggttttactttgtcttctgaaaaaatcagatactcgagaaagtgtt
ctagagtttctagcagctgtgatcaataacaattcctcaagggcgcatttgcagattgat
ccattgacgtgtgcaagctctggcatgtttgttaatcttagcgctgttatgcttaggctt
tgtgagccatttttagatgctaagctcagtaaacgagataaaatcgatcctagctacgta
ttttacagtaaccgtttggatttaagagcactaacagctctccatgcatcgtcagaggaa
gtttctgaatatatttctgagcttaataatggaagattagatgattctactgataataac
gttccagataaccgcttgttgacatctttggaagccactggttctggcaataattctggt
ggaccttctgttcagagtgttcagaatgttagatatcctttcatttgtgaatgcttcttt
atgacggcaagggttcttaacttgggtgtactaaaagcattttctgatttcaagcatcta
gttcaggatatttcgaggtctgaagattccctggctacctcaaaggcgatgctcgagcaa
gctcctacgcgtcagttggagctggatatagctcgtcttgaaaaggagattgaatcattt
tcacaggagaagttgtgttatgaagcacaaattcttagggatgggggactgattcaacaa
gctttatcattttgccggttaatggttgtatggttggttggcctagttggtggttttaaa
ctgccccttcgattaccttgtcctatggcgtttgcttgtatgccagaacattttgtggag
gatgcaatagagttgctgatatttgcatctcggatcccaaaagctttggatggtgtcgaa
ttggatgatttcatgaatttcatcatcatgtttatggcgagccctgaatatgttagaaat
ccttatctaagagccaaaatggtcgaagtgctgaattgttggatgcctcgaaggagtggc
tcttctgcaacagctagtctatttgaaggacatcaattgtctctgcaatatcttgtcaag
aatcttttaaagctgtatgtagacattgaattcacgggttctcacacacagttctatgat
aaattcaatatccgtcacaatattgcagagcttctggaatacctttggcaggttcctagt
caccgtaatgtttggagacagattgcaaaggaggaagaaaagggtgtctaccttaatttc
ttaaatttcctgattaatgatagcatctacctcctcgacgagagtcttaataaaatcctt
gaactcaaagcattggaagctgagatgtccaatactgttgaatgggaacaaaggcctgct
caagagaggcaggagagaactcggcttttccattcccaagagaatataataagaattgat
atgaaactggcaaatgaagatgttagtctgctggcttttacttcagagcagatcacatcg
cctttccttcttccggagatggttgaaagagtcgctagcatgctaaattactttttgcta
caacttgtgggtccccagaggaaatcgcttagcttgaaggatcctgaaaagtatgagttc
cgtccaaaacatttgctcaaacagattgtcaacgtatatgttcatctggcaagaggagat
aagggcaatgttttccctgctgcaatctcaagggatggtcgctcatataatgaacagttg
tttagtgctgcagctgacgttcttatgaggataggagaagatggaaggattatacaggag
tttgttgaacttggtgcaaaagctaaagccgcagctgttgaagccatggatgcagagaat
gctcttggtgatatacctgatgaattcttggacccaattcagtacacgctgatgaaggac
ccagttatattgccatcttctcgagtcattcttgatcgtccagtcatcttgaggcatcta
ctgagtgatagtaccgatcctttcaatcgttccccacttactcccgacatgttaattcct
gatcatgagctgaagtcaaaaatcgaagaatttgtaaggagccattcaactaggaacctt
gatgatggtataaacgcgacaagcgcgaaaggaacgatacaaactccaacaaccgagatg
caattgattgattaa
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