Brevundimonas vitisensis: JIP62_08005
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Entry
JIP62_08005 CDS
T07812
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bvit
Brevundimonas vitisensis
Brite
KEGG Orthology (KO) [BR:
bvit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvit03400
]
JIP62_08005 (addB)
Enzymes [BR:
bvit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JIP62_08005 (addB)
DNA repair and recombination proteins [BR:
bvit03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JIP62_08005 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QQQ17308
LinkDB
All DBs
Position
1578057..1581161
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AA seq
1034 aa
AA seq
DB search
MTSRFDPFHGDAPRWWTIAAHRPFLVDLAAGVLDWLGDAAPETLSDAVILLPNRRAARAF
TAALAQQAGDRPVLLPQVRPLGDLEEDEPPFAPGELGLDLPPAIAPLTRRFEMARMIVEE
FEPGLKPLRALEMADALGGFLDSCQLEEIEDPSRVATLVEGDLAQHWQESARFLGLAIEA
WPRRLAALGLVDPAWRKASLLRLLATRWGDDPPTGPVIAAGSTGSVPAAADVLHAVARAP
QGCVVLPGLDLGLDARVWAGLGDEDQHPQNALYRLLDRHQVPRDAGRPWFAPAVPSARGL
ARERLINEALRPARATSDWRAEIARLRAEAAPHQAADPIALGLEGLSVLTLRHEEDAAAT
LALMMRETLERVQPDGRPSTCALVTPDLALGRRVAARLERWGIVADSSSGTPLSRMPAGV
FIDLAARFMAPPTGQKSLKPQTLLALLKSPLIRLEGLDAAPVLEADALRGPAPRDWAEIR
KRLLRATQPKRDGDIVSDARKARLAEAQSLADRLEALWAQARLPFDDDGHAPLDQAARTL
TELVEALAGQAVWSGPDGEAASGLLSALIEGGASLGTIRSIDFAELVQGLLGDQTVRTGG
ATHPSLRILGAIEARLVRADRMILAGLEEGVWPNAAPVDPFLSRPMRGALDLPPPERRLG
QTAQDFVQAACADEAILVHCERRGGQPAVKSRWLWRLEMMTRGADSPSTPVTLSRPGEVA
ELARALDAPAPGPPRYAQRPMPRPPVDRRPREMPVTGIERWVRDPYAVYAQRILGLKVMD
RPGASAEAMARGNAIHAAIERIVTTWPDTLPEDCAPQIEDFIHQALREAGFEDAAMAREV
PLARHCARWLDRFERERRARGATLLIEQTGQMTFDAPVGPFTLTAKADRIELDADGAAVI
DFKTGRTPSQKEVLAGFAPQLTLTAAIMAAGGFAPTAPATEATELLYVKITGRGEVGSVA
DVAKMTGKQTLNAAQLAERELNRLRDGVAAFDDVATPYASWVAPQFMGNFGGNYDHLARV
WEWHVVGGEDEAVE
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccgcttcgatcccttccatggcgatgcgccccgctggtggacgatcgcggcg
catcggccgttcctggtcgatctggcggctggggttctggactggctgggagacgccgca
cccgaaaccctgtccgatgcggtgatccttttgccgaaccgccgcgcggcgcgggccttt
accgccgccctggcccagcaggcaggcgatcgcccggtgctgttgccccaggtccggccc
ctgggggatctggaagaggacgagccgcccttcgctcccggcgaactgggtctggacctg
ccgcccgccatcgcgccgctgacccgccggttcgagatggcgcggatgatcgtcgaggaa
ttcgagcccggcctgaagcccctgcgcgcgctggaaatggccgacgccctgggcggattt
ctggattcctgccagttggaggagatcgaggacccgagccgggtcgccaccctggtcgag
ggtgacctggcccagcattggcaggaatcggcccggttcctcggcctggcgatcgaggcc
tggccccggcgactggcggcgctcggcctggtcgatccggcctggcgcaaggcctcgctg
ctgcggttgctggccacgcgctggggcgatgatccaccgaccggtccggtcattgccgcc
ggatcgaccggctcggtgccggccgccgccgatgtgctgcatgccgtggcgcgggcaccc
caggggtgtgtcgtcctgccgggactggaccttggtctggatgcccgcgtctgggccggg
ctgggagacgaggatcagcaccctcagaatgccctctaccgcctgctcgaccggcatcag
gttccgcgtgacgccgggcggccctggtttgcccctgccgttcccagtgcgcgcggtctg
gcccgagaacgcctgatcaacgaggccctgcgcccggcacgcgccaccagcgactggcga
gccgagattgcgcgccttcgcgccgaggccgcgccgcaccaggctgccgatccgattgcc
ctgggcctggaggggctgtcggtcctgaccctgcgccatgaagaggacgccgccgccacc
ctggcgctgatgatgcgcgagacgctggagagggttcagccggacgggcgacccagcacc
tgtgccctcgtgacgccggacctggccctgggccgccgggtggctgcgcggctggagcgg
tggggcatcgtggccgattcctcgtcgggcacaccgctgtcgcggatgcctgccggcgtc
tttatcgacttggcggccagattcatggctccgccgacgggccagaagtcgctgaagccc
cagaccctgctggcccttctgaagtcacctctgatccggctggaggggttggacgccgcc
ccggtgctggaggccgacgccctgcgcggcccggccccccgcgactgggccgaaatccga
aagcgcctgttgagggccacccagcccaagcgcgacggcgacatcgtctcggacgcccgc
aaggcccgtctggccgaggcgcagagtctggccgaccgtctggaagccttgtgggcccag
gcacgcctgccgttcgacgacgacggtcatgccccgctggatcaagccgcccgtaccctg
accgaactcgtcgaggccctggccggtcaggccgtctggtccggaccagacggagaggcc
gcgtccggcctgctgtccgcattaatcgagggcggggcgtcgctggggaccatccgcagc
atcgatttcgcagaactggtgcagggcctgcttggcgatcagacggttcgcaccgggggg
gccacccatccttcgcttcggatcctgggggccatcgaagcgcggctggtccgggccgac
cgcatgatcctggccgggctggaggaaggcgtctggcccaatgccgcaccggtcgatccg
tttctgtcgcgaccgatgcgcggcgcgctggacctgccgccgcctgagcgtcgtctgggt
cagacggcacaggacttcgtccaggcggcctgcgcggacgaggcgatcctagtgcactgc
gagcgccggggagggcagcctgccgtcaagtcccgctggctctggcggctggagatgatg
acgcgcggggccgacagcccgtcaaccccggtcaccctgtcgcggcccggagaagtggcc
gaactggcgcgcgccctggatgctccggcgccgggcccgcctcgctatgcgcagcggccg
atgccccgcccgcccgtcgaccggcgcccgcgcgaaatgccggtgaccgggatagagcgc
tgggtccgcgacccctatgccgtctatgcccagcgcatcctgggcctgaaggtcatggac
cgtcccggagcctcggccgaggccatggcgcgtggcaatgccattcacgccgccatcgag
cgcatcgtcaccacctggcccgataccctgcccgaagactgtgcgccccagatcgaagac
ttcatccatcaggccctgcgcgaggccgggttcgaggacgcggccatggcgcgggaggtg
ccgctggcccgccactgcgcccgctggctggaccgtttcgagcgcgaacgccgcgcgcga
ggggccaccctgctgatcgaacagaccggtcagatgaccttcgatgcgccggtcgggccc
ttcactctgacggccaaggccgaccggatcgagctggatgccgatggcgccgccgtgatc
gacttcaagaccgggcgcaccccgtcccagaaggaggtgttggccggtttcgcgccgcag
ttgaccctgaccgccgcgatcatggccgcgggcggctttgcccccactgcccccgcgacc
gaggcgacggaactgctctatgtgaagatcaccggacgcggcgaagtcggctccgtcgcc
gacgtggccaagatgaccgggaagcagaccttgaacgcggcccagctggccgagcgagag
ctgaaccgcctgcgtgacggtgtcgccgccttcgacgacgtggcgacgccctacgcctcc
tgggtcgcgccgcagttcatgggcaatttcggcggcaactacgaccatctggcccgcgtc
tgggaatggcatgtggtcggcggcgaagacgaggccgtggaatga
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