Bacillus vallismortis: B9C48_13355
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Entry
B9C48_13355 CDS
T04948
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bvm
Bacillus vallismortis
Pathway
bvm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B9C48_13355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvm03400
]
B9C48_13355
Enzymes [BR:
bvm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B9C48_13355
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B9C48_13355
DNA repair and recombination proteins [BR:
bvm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B9C48_13355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ARM28775
LinkDB
All DBs
Position
complement(2753590..2754426)
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AA seq
278 aa
AA seq
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MIVPELPEVETVRRTLTGLVKGKTIESADIRWPNIIKKPAEPEEFARQIAGETIRSIGRR
GKFLLFHLDHYVMVSHLRMEGKYGLHQADEPDDKHVHVVFHMTDGTQLRYRDVRKFGTMH
LFAPGEELNALPLSQLGPEPDDEAFTAAYLKERLAKTNRAVKTALLDQKAVVGLGNIYVD
EALFRARIHPETKANSLSDGQIKTLHTEIKDTLQEAIDAGGSTVRSYINSQGEIGMFQLK
HYVYGKKDEPCKTCGTMISKIVVGGRGTHFCARCQKKS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgccggaattaccagaagttgaaacggtccggcgcactctgaccggtcttgtg
aaggggaaaacgattgaatcggcggatatcagatggccgaatatcatcaaaaaacccgcc
gagccggaggaattcgcgcggcagattgcaggagaaaccatccgatccatcggaagaagg
ggaaagtttttgcttttccatctggatcattatgtcatggtgtcccacctgcggatggag
gggaaatacggccttcatcaggccgatgagcctgacgataaacatgtgcacgtcgtgttt
cacatgacggacggaacacagctccgctacagggatgtccggaaattcggcacgatgcat
ttgtttgcgccgggagaggaattgaatgcattaccgctttcacagctcgggcccgaaccc
gatgatgaagcatttaccgctgcttatttaaaagagcggcttgcaaaaacgaaccgcgcg
gtgaaaacagccctgctcgaccaaaaagcggtcgtcggcctcggcaatatttatgtcgat
gaagctttattccgggcgcgtattcatcctgagacaaaagcgaacagtctgtcagacggg
cagataaaaacgcttcatacagaaattaaagacacccttcaggaagcgattgacgcgggc
gggagcaccgtccggtcttatatcaattctcaaggggagatcggaatgtttcagctcaaa
cattacgtatacggcaaaaaggatgaaccgtgcaaaacgtgcggcacgatgatttctaaa
atcgtggtcggcggaagggggacgcatttttgcgcccgctgccaaaaaaaatcataa
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