Bremerella volcania: Pan97_20450
Help
Entry
Pan97_20450 CDS
T06456
Name
(GenBank) Cadherin domain protein
Organism
bvo
Bremerella volcania
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Big_13
Big_6
Cadherin_4
EF-hand_7
Big_9
bMG3
Dockerin_1
EF-hand_8
Motif
Other DBs
NCBI-ProteinID:
QDU75025
UniProt:
A0A518C721
LinkDB
All DBs
Position
2411640..2420270
Genome browser
AA seq
2876 aa
AA seq
DB search
MRLESLEIRDLLAANTLDFVDNLEIGSPGEKRDLQLEVDPSSGTAIVALRIQGTSGNLDP
AIPLVFIQDTDRNNPANHVPLMQAMANANGSTDSVVLFEVSAGANFTIEVGGTSGSGGFL
AEVMLFGSTDGDGTVSENEYMRSVAAELQARGAGNHNTAAYFQSVYGIDFNTSQYNAAFD
ANLNGKIDGFEVGYVESNMGGAPVILDLIGDNEAPAVEAAVAVDTGSSTTDNITSDTTGI
SGTITDFSKIVSAEISIVGGTGGSIDLADTNTPPSISALNQTDNEITFTLSIADLDALLG
AGTVLNTGSYTLEVTTEDELGNTSITPFQLVFEFDNAAPAAPTTPDLDAGSDSGDSDTDD
LTNDTTPTFTFTAEANSTVAIISDLDGQLGTATADGSGNVTFTAPTGLSEGTHVITATAT
DTAGNVSAASSGLSIVIDTVSPADVSAIMQTNNPTNPNLTPETTATFTGTTEANASVAIL
DSNSAVITTTTADGSGNFTFTGIALVLGQNDFSFVATDAAGNESDPVSFTVFRNTQPTID
AGIFSIDENSSVGAAVGTVTADSQDGPTDTLTYSITGIDSGFEGTFAINASTGAITVADT
ANLNFENKTSFTVEVQVIDSKGDGLGGAGLVTTQNITINVNDVNEAPVFAQDPYTLTVEE
NSTNPTVVSGGPIVATDVDADDQGTNLTYAITGGTGASLFDIDPTTGVVTVKTGATLDYE
TTDSYTLDISVTDKLDGDSNGEVGAVNTVTQTATVNLIDVNEAPVITSGTTADIAENSAN
GTVVTTVTATDVDEDDPPFTFAITGGTGVGVFDINTSTGEITVIDSASLNFEGGTTSFTL
DIEVTDNLDGNGLGEVGMVLSDNFQLTINVTDVNDAPVAVAAPTLQIDENAAATTAVTTD
GTIVADLTDYFTDEDMDTLTFSIIGGNNGAFAIDGDNIVVADSTKLDFETSGLNSYTLTI
LATDDGTGMLTAQQDIDIQVINLNELPIIPGGTISFPNISLLDVDDASDVNDFSLDIGLT
DPENDTLTFSGDEFSVVAAQDVDGFFQLNTDGTIELLMPLSQLDLDVNGERTFTITFYMD
DDNSTLTDTPGINRGPFTLQLMVTDNEAPVFVQPAGMAFTIEENVDDSIMDGDSLTPAVI
LEATDVENDAFTFTIEPSASNSSQGLVDLFELVLVDDMGTGDPNDDTYELVVADAAGLTF
DNVNFLGATGGVFDIDLVVTDAVGRFSTKTITITVTDENNRPTFVDPGNQSVDEFVETAT
GSLGAESGDVVYNLGGAFSDIDAAANLSYNIDAAVLTGTSTDITGAFTIDGDEIKVDMAQ
LIDFEGLTPKSITLTITADDGQGEANSTVTGDITILINDLNELPIYDSPTDAFEIPFVDV
DDEFLGTPIVLGNISSVLTETDPEGDTINFSQISMGGTGFEYFSLGTDGTISLIKNVPDE
MFSNQERFFTLTFDYNDGVGGDSLDSNTNLGFSPFELTIRVFQNPPATFDDPGNYDFSVD
ENTPVSSTMVQTVSATDPEGETVTYSIDDPSGTFDIDANTGVITIIDNTALNFEANTQLT
ITVFAIDEAMNMTPETITVTINDVNEAPVIDNNPGPFNIDEDIADLTFVGQVMITDVDAG
DSHTFEIVGGDPNGVFAIDNSGNITIADNATIDFETTDVYTLEIKVTDNGGPTPGSNKLF
DSQSFTINVGDVNEAPVKIGADFALPIVDESDLTTQEITDPLATAGTSFVKRFDIDVSSF
YADPEMSDVLLQVNTDFDGDTPDFTAGGHIISATFDNVNDQLVVVFEYYGVDQDRAPTEI
ELIAVEDTVDMLQATSPLNITVSVTNEQAVDFQFIPVLNPTIDSTNGFDGVSFANLPTAT
DRFADEQTFFVEIWGTTLVGQDDVSDGNNGVDGPQNAWIEGFRLVVLGLQYRDDLVDVID
IIAPAQALGEGGDPIEWMNGEVNNFNAFFGSTGSLDLEPPIPGFGSIGGDGSYVRLGYLQ
LQAKVGVEISNVTDLVSINFADSETSIALNGADEGDLQPPGDPENPIPRTADIETTIDPS
QITIVSTPVDIVDAEKFTISSTNSQAVIGVLGQSTIDGLEVSGQGGNGVGNVTSFTGNIF
VLFSGSETDPDSFEIIGSELILTENPNGPFSPGEPTTPGGEPVGAASDPANFGLEAFEPT
QNLPTQVAVRETVLRIGGMPQVTFGQSDDPFNSEVSFNSSGFNYDIASGFADIVSEQPFG
QGSLTFAERNNLGGISLNSNGTETSSIEGDSNGGYVLTLNLSRLIQETFNVQQITANANL
AFSGTIVATTGGAVPLQGTVFVKDGQPLEDGSGMFVTVNKTRTATDASGQVAELPDNVDW
ASEWDSLWVEVWGNTADASGVYGGTLDLAYNTDLYTATQIEYASSMTVGRGGSIDDANGT
ITGLGSQSEVYTMGNGSFVLLGRVKLESLPGDGIDVSVGGDLSAESLGLAATNAKIMLSG
IGAVDPDVTDVAEVDVWAVAYDANDDGKIGIADFSQFISAYGKSTLTANNALLAALDFDN
SGRVGLSDFSAFIQNYGKNKLNAASIKYPETFTQMWVGKGVELNGPDSLQDVFDQAISDW
QDALGWEEPIDVKLVVKDFGDAQLGEAELLGLDENGLPQFGILTLDDDGAGLGWSSDLEG
GPAEGQYDLYTVILHELGHLYGFMSHYAGFADNVVTDHDGNKIFIGSDFVAVLDDYAHHL
DATEHMGDVMNAALDPGQRKLISALDVQILQTAYESATSGQSVGGGSAALHATVTTQSIV
EETIAPVVTEAPVSFVFDKVVDVESVSGRTGYEATISPVVYNELIKNGVRVTTSSSTEVQ
QQIEEVDSAVATLAIEDSSLLLADSVENAEYFATEEDSTNVDDLFAEWDFNSDLEG
NT seq
8631 nt
NT seq
+upstream
nt +downstream
nt
atgcggttggaaagtcttgagattcgcgacctgctcgccgcgaatacgctcgacttcgtc
gacaatcttgaaattggttcgccgggtgagaagcgggaccttcagttggaagttgatcct
tcgtccggcaccgcgatcgttgccctgcgaattcaaggcaccagcggcaacctggatcct
gcgattccgctcgtgttcatccaggacaccgaccgcaacaatccagccaatcacgtgccg
ctgatgcaggcgatggccaacgccaacggcagcaccgacagcgtcgtcctgttcgaggta
tccgccggggcgaatttcacgatcgaagttgggggaacttcgggatcgggcggcttcctg
gccgaggtcatgctcttcggttcgaccgacggggacggcaccgtttcggaaaacgaatac
atgcgatctgtggctgccgagttgcaggcacgcggtgctggcaatcacaacacggccgcc
tatttccaatcggtttacggaatcgacttcaacacttcacagtacaacgcggcattcgac
gccaacttgaatggcaagatcgatggcttcgaggtgggctacgttgagtcgaacatgggg
ggagcgccggtcatcctcgatctgattggtgacaacgaagcaccggctgtcgaagcggcg
gttgctgtcgataccggtagctcgacgaccgacaacatcaccagcgacacgaccggcatc
tcagggacgatcaccgatttcagcaagatcgtctcggcagagatctccattgtcggcggc
accggcgggagcatcgacctggccgacaccaatacgccaccgagcatttcggctctgaac
cagaccgacaacgaaatcaccttcaccctcagcatcgccgacctcgacgccctgctgggt
gccggcacggttctcaataccggcagctacacgctggaagtcaccaccgaggatgaattg
ggcaacaccagcattacgccgttccaattggtcttcgagttcgacaatgcggcacctgcg
gcaccgacgactcccgatctggatgctggcagcgactcgggcgacagcgacaccgacgac
ctgaccaacgatactacgcccacgttcacgtttaccgcggaagcgaactcgacggtagcg
atcatttccgacttggatggccaactcggaaccgcaaccgccgatggctcgggcaacgta
acgtttaccgcgccaaccggattgtcggaaggtacccatgtgatcacggcgacggccacc
gataccgctggcaacgtcagcgcggcttcgtcggggttatcgatcgtgattgatacggtc
agtccggccgacgtcagcgcgatcatgcagacgaacaatccgaccaatcctaatctgacc
ccggaaaccacggcgaccttcaccggaaccaccgaagccaacgcttcggtggccattctc
gatagcaactcggcggtcataacgacgaccacggccgacggctcgggcaacttcaccttt
accggcatcgcgttagtactgggccaaaacgatttctcgttcgtagccaccgacgccgct
ggcaacgaatccgacccggtctcattcaccgtattccgcaacacccagccgaccatagat
gcaggcatcttctcgatcgacgaaaactcgagtgtcggagcggccgttggtaccgttacc
gcggactcgcaagatggtccgactgataccctgacctactcgatcaccggcatcgactca
ggcttcgaaggaactttcgcgatcaacgcgagcaccggggcgatcaccgttgccgatacc
gcgaacctgaacttcgagaacaagacctcgttcaccgtcgaggttcaggtcatcgacagc
aagggggatggtcttggtggtgccggtctcgtgacgacgcagaacatcacgatcaatgtg
aacgacgtcaacgaagcaccggtctttgcccaggatccttacacgctgaccgtcgaagaa
aattccacgaatccaaccgtggtgagcggcggtccgattgtcgccaccgacgtcgatgcc
gacgatcaaggtaccaacctgacttacgcgatcaccggcggaaccggtgcctcgttgttt
gacatcgatcccaccaccggcgtggttaccgtcaagacgggagcgacgctcgattacgaa
accactgattcctacacgctcgacatttccgtcaccgataaactcgacggcgatagcaac
ggagaagtcggtgcggtgaacacggttacccagaccgccaccgtgaacctgatcgacgtc
aacgaagctcctgtcatcaccagtggtaccacggcagacattgccgaaaacagtgccaac
ggaacggtcgttaccacggtaacggcaaccgacgtcgatgaagacgatcctccgtttacg
ttcgccatcaccggcggtaccggcgttggtgtctttgacattaatacgtcaaccggcgag
atcaccgtcatcgactcggcttccctgaactttgaaggggggaccacctcgttcactttg
gatatcgaagttaccgacaatctcgacggcaacggcctgggtgaagtcggcatggtgctg
agcgataacttccagctgacgatcaacgtaaccgacgtgaacgacgctccagttgctgtg
gctgctccaacgctacagatcgatgaaaacgccgccgccacgaccgccgttaccaccgat
ggaacgatcgttgcggatctgactgactacttcaccgatgaagatatggacacgctcacc
ttctccatcatcggtggaaataacggggcgttcgccatcgatggagacaacatcgtcgtc
gccgattcaacgaagttggacttcgaaaccagcggactcaacagctacacgctgaccatc
ctggcgaccgacgacggcaccgggatgttgaccgctcagcaggatatcgacatccaggtc
atcaacctgaacgaactgccgattattccagggggtacgatctcgttccccaatatctcg
ctgctggacgtggatgatgcgagcgacgtcaacgactttagcctcgatatcggcctgacc
gatccagaaaacgacaccctcaccttctccggtgacgaattcagcgttgttgccgctcag
gatgtcgacggcttcttccagctgaacaccgatggcacgatcgagcttctcatgccgctg
tcgcagttggatctcgacgtcaacggcgagcgcacgtttaccattacgttctacatggac
gacgacaactcgacgctgaccgatacccctggtatcaatcgaggaccgttcacgctgcag
ttgatggtcaccgacaacgaggctcccgtcttcgttcagcctgccggcatggctttcacg
atcgaagaaaacgtcgatgacagcatcatggacggtgacagcctgacgcctgcggtgatt
ctggaagcgactgacgtagaaaacgacgcgttcacgttcaccattgagccaagtgcatcg
aattccagccagggtctggtcgacctgttcgagttggtcctggtcgatgacatgggcacc
ggcgacccgaacgacgatacctacgaactggtcgttgccgatgccgctggcctgacgttc
gacaacgtcaacttcctgggggctaccggcggtgtctttgatatcgacctggtcgtgacg
gatgccgtaggtcgcttcagcaccaagacgatcaccatcaccgttaccgacgaaaacaac
cgtccgaccttcgtcgatccaggcaaccagagcgtcgatgaattcgtcgaaacggcgacc
gggtcgctgggcgccgaatcaggcgacgtcgtttacaatctcggtggtgccttcagtgat
atcgatgccgcagctaacctgagctacaacattgatgccgccgtcttgaccgggacttca
accgatatcaccggggcgttcacgattgatggtgatgaaatcaaagtcgatatggcccag
ttgatcgactttgaaggtctcaccccaaagagcatcacgctgacgatcaccgctgacgac
ggccagggtgaagctaatagcacggtcaccggcgacatcactatcctgatcaacgacctc
aacgaactgccaatctacgattcgccgaccgatgcgtttgagattccgtttgtcgacgtc
gacgacgagttcctcggtacgccgatcgttctggggaacatctccagcgttctgaccgag
accgatcccgaaggggataccatcaatttctcccagatctcgatggggggcactggcttc
gagtacttctcgctaggtaccgatggcaccatctcgctgatcaagaacgtgcccgacgaa
atgttctcgaaccaagagcgtttcttcacgctgacgtttgattacaacgacggcgtcggc
ggcgatagcctggactcgaataccaatctaggattcagcccattcgagctgacgatccgc
gtcttccagaatccgcctgcgacgtttgacgatccaggcaactacgacttctcggtcgac
gaaaatacgccggtcagcagcaccatggtgcagaccgtctcggcaactgacccggaaggt
gaaacggttacctacagcatcgacgatccatcgggcaccttcgacatcgatgcgaatacc
ggcgtcatcaccatcatcgataacaccgctctcaacttcgaggccaacacacagctcacg
atcaccgtcttcgccatcgacgaagcgatgaacatgacgccggaaacgatcacggtcacg
atcaacgacgtcaacgaagctccggtcatcgataacaacccaggtccgttcaacatcgac
gaagacatcgccgatttgacgttcgtgggccaggtgatgatcacggacgtggacgcaggc
gattcgcacacgtttgaaatcgttgggggcgacccgaacggcgtgttcgctatcgataac
agcggtaacatcacgatcgcggacaacgccaccatcgacttcgaaaccacggacgtttac
acgctcgaaatcaaggtcaccgacaacggtggtcctacgccgggctcaaacaaactgttc
gactcgcagtcgttcaccatcaacgtgggtgacgtcaacgaggctcccgtcaagattggc
gccgacttcgcactgccgatcgtcgacgagtccgacctgaccacgcaagagattaccgat
cctctcgctaccgccggaacgagcttcgttaagcgttttgacatcgacgtcagcagcttc
tatgccgatccggaaatgagcgacgttctgctgcaggtgaacacggacttcgatggagac
accccagacttcaccgccggtggccacatcatcagtgccactttcgacaacgtcaacgat
caactcgtggtcgtgttcgagtactacggcgtcgatcaagaccgggccccgaccgaaatc
gaattgattgccgtcgaagataccgttgacatgttgcaagcgacctcgccgctcaacatt
accgtctcggtcaccaacgaacaggccgtcgacttccagttcatccccgtgctcaaccca
acgatcgacagcaccaatgggtttgatggcgtctccttcgccaatctgcctacggccacc
gatcgattcgccgacgagcaaaccttcttcgtcgaaatctggggtaccaccctggttggc
caggacgatgtttcggatggcaataacggcgttgatggtcctcaaaatgcctggatcgaa
ggtttccgcctggtcgttctggggctgcaataccgtgatgatctggtcgacgtgatcgac
atcattgctcctgctcaggccctgggcgaaggtggcgacccaatcgaatggatgaatggc
gaggtcaacaacttcaatgccttcttcggttcgacgggttcactcgatctcgaaccgccg
atcccaggcttcggctcgatcggtggtgacggaagttacgtccgacttggctatctgcaa
ctgcaagccaaagttggggtcgaaatcagcaatgtcaccgacctggtatcgattaacttt
gccgatagcgaaacgagcatcgccctgaacggtgccgacgaaggggatctgcagccccca
ggtgatccggaaaaccccattccacgaaccgccgatatcgaaactacgatcgacccatcg
cagatcacgatcgtcagcacgccggttgatatcgttgatgccgagaagttcactatttcc
tccaccaatagccaagcggtcatcggtgtgcttggtcaaagcaccattgacggcctcgag
gtgtccggccagggtggaaatggcgtcggcaacgtaacgagcttcaccggtaacattttc
gttctcttcagtggcagcgaaaccgacccggattcgttcgagatcatcggttcggaattg
atcctgactgagaatccaaacgggccattcagccctggcgaaccaaccaccccaggcgga
gaacctgtcggagcggccagcgatcctgcgaacttcggcttggaagcattcgagcctact
cagaatcttccaacgcaagttgccgttcgcgaaacggtgcttcgcatcggtggaatgcct
caggtaaccttcggtcaatcggacgacccgttcaactcggaagtcagcttcaattcgtcc
ggattcaattacgacatcgcttccggtttcgctgacatcgtcagcgagcagccgttcggc
caaggttcgctcacgttcgccgaacgcaacaacctgggtggcatttcgttaaattccaac
ggaaccgagacgtcgtccatcgaaggtgattccaatggcggttacgtcctcacgctgaac
ctgagccgcttgattcaggaaactttcaacgttcagcaaatcacggctaacgccaacctg
gcgttcagcggaaccatcgttgccacgaccggtggtgcggtgccgctgcaaggtaccgtc
ttcgttaaggatgggcagccgctggaagatggttccggcatgttcgtcacggtcaataag
acccgcaccgcaaccgacgccagtggtcaggtagcggaactgccagacaacgtcgactgg
gcctcggaatgggactcgctgtgggttgaagtttggggtaacacggcagacgcaagtggc
gtctacggtggtacgctcgacctggcctacaacaccgacttgtacactgccacccaaatc
gaatacgcctcgtcgatgaccgtcggtcgcggtggttcgatcgacgacgccaacggcacg
atcaccggtctgggcagccagtcggaagtctacacgatgggcaacggctcgttcgtcctg
ctgggacgcgtcaagctcgaatcgctgccgggtgacggcatcgacgtctcggtgggtggc
gacctgtcggccgaatcgctcggcctggccgcaaccaacgccaaaatcatgctcagcggt
atcggcgcggtcgatcccgatgtgaccgacgttgccgaggtcgatgtctgggccgtcgct
tacgacgccaacgacgacggcaagatcggcattgccgacttcagccagttcatcagtgcg
tacggcaagtcgacgctgacggccaacaatgccctgttggctgcgttggacttcgataac
agtgggcgtgtggggctgtccgatttctcggccttcatccagaactacggcaagaacaag
ctgaacgccgccagcatcaagtatcccgaaaccttcacccagatgtgggttggtaagggg
gttgaactgaacggtccagacagcctgcaggatgtctttgaccaagccatcagcgactgg
caagacgcactgggttgggaagaaccaatcgatgtcaagctggtcgtgaaggacttcggc
gatgcccaactgggtgaagccgagcttctggggctcgacgaaaacggcctgccgcagttc
ggtatcttgaccttggacgacgacggtgccggtctgggttggagttctgacctggaaggc
ggccccgccgaaggccagtacgatttgtacaccgtgatcctgcatgaactgggtcacttg
tacggcttcatgtcgcactatgccgggttcgcggacaacgtggtcaccgaccatgatggc
aacaagatattcatcggttccgactttgtcgcggtcctggacgactacgcacatcacctg
gatgccaccgagcacatgggcgacgtgatgaacgctgccctcgacccaggccaacgtaag
ctgatttcggctctggatgtccagatcctgcaaacggcctacgaatcggctacctccggt
caatcggtcggcggtggttcggctgctctgcatgccaccgtgacgactcagtcgatcgtc
gaagaaacgatcgctccggttgtcaccgaagctccagtttccttcgtgttcgacaaggtg
gtcgatgtcgaaagcgtcagtggccgcaccggctacgaagcgactatctcaccggtcgtt
tacaacgaactgatcaagaacggtgttcgtgtgacgacctcctcgtccaccgaagttcaa
cagcagatcgaagaagtcgactcggcggtagccacgctggcgatcgaagactcgtcgctg
ctgctggcggattcggtcgagaacgcggaatacttcgccaccgaagaagattcgaccaac
gtcgacgacctgttcgccgaatgggatttcaactcggatctggaaggttaa
DBGET
integrated database retrieval system
