Barnesiella viscericola: BARVI_04125
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Entry
BARVI_04125 CDS
T02986
Name
(GenBank) sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
bvs
Barnesiella viscericola
Pathway
bvs00511
Other glycan degradation
bvs00600
Sphingolipid metabolism
bvs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bvs00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
BARVI_04125
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
BARVI_04125
Enzymes [BR:
bvs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
BARVI_04125
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Gene cluster
GFIT
Motif
Pfam:
BNR_assoc_N
BNR_3
BNR_2
BNR
Sortilin-Vps10
Motif
Other DBs
NCBI-ProteinID:
AHF12110
UniProt:
W0EMP3
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Position
complement(1001627..1003258)
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AA seq
543 aa
AA seq
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MRRFFLFLSWVGLAAIAVAADTVFVKEARVPVLLERQDNVLFYLRIPARESRVLDGVTLD
LSDCDARGDIAAVKLYYGGVEARQDEGKNRFAPVAYVSSQHAGKTLAADPSYSIECARVD
NPGKRIELRADYKLYPGVNFFWVSVQMKPGASLASKLRAGVESVSLDGAAALCRRVSPEG
IEHRMAIGVRHAGDDGVAAFRIPGLVTTDRGTLLGVYDVRYNSSVDLQEHIDVGLSRSTD
GGKSWEPMRLPLSFGEYGGLPAAQNGVGDPSILFDPHTRTVWIAAAWTHGMGNQRAWWSS
QPGMDMERTAQLVLTKSTDDGQTWSAPINITSQVKDPSWRFLLQGPGRGIAMHDGTLVFP
IQFIDSVGVPSAGVMYSRDGGESWHIHNPARSNTTEAQVVELADGVLMLNMRDNRGGSRA
VAVTADLGRTWTEHESSRRALPEPVCMASLIRVEADDNVLGRDLLLFSNPNTTKGRHHIT
VKASLDGGATWLPENQLLLDEEEGWGYTCLTMVDRETVGILYESSVAHMTFQTFKLTELV
RKK
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagatttttcctctttctctcttgggtggggctggccgcgatagcggtggccgcc
gatacggtttttgtcaaggaggctcgggtgccggtactgctcgagcggcaggacaatgtg
ttgttctatttgcgtattcccgcccgggagagccgggtgctcgacggggtgacgctcgat
ttgtcggactgtgatgcccggggtgacatcgctgccgtaaaactctattacggtggtgtg
gaggctcggcaggacgaggggaagaatcgctttgccccggtcgcctatgtgtcgagccag
catgccggtaagacgttggcggccgacccgtcgtattcgattgaatgcgcccgggttgac
aatccgggcaagcggattgagttgcgggccgactacaagctgtacccgggtgtcaatttc
ttttgggtgagtgtgcagatgaagccgggcgcctcgctcgcctcgaagctgcgggccggg
gtggagtctgtctcgctcgacggggcggcagctctctgccggcgagtgtcgcccgagggt
atcgagcaccgcatggccatcggggtgcgccatgccggcgacgacggggtggcggcgttc
cgcattcccgggttggtgacgaccgaccggggtacgttgctgggagtgtatgacgtgcgc
tacaacagcagtgtcgacttgcaggagcacatcgacgtggggctgagccgcagcaccgac
ggcggcaagagttgggaacccatgcgtttgcccctctcgtttggcgaatatggcggtctg
cccgccgctcagaatggcgtgggcgacccctcgatactcttcgacccccacacccgcacc
gtgtggattgccgcggcctggactcatggcatgggcaaccagcgggcctggtggagttcg
caaccgggcatggatatggaacgcacggctcagctcgtgctcaccaaaagtaccgacgac
ggccaaacctggtcggcccccatcaacatcacttcgcaggtgaaagacccctcgtggcgg
ttcctgctgcaaggtccggggcggggtatcgccatgcacgacggtacgctggtctttccc
attcagtttatcgactcggtgggggtacccagtgccggggtgatgtacagccgcgacgga
ggcgagagttggcacattcacaatccagcccgaagcaataccaccgaggctcaggtggtc
gagttggccgacggtgtactcatgctcaacatgcgcgacaaccggggcggaagccgggcg
gtggccgtcaccgccgatctgggccgtacctggaccgaacacgagtcgtcgcgccgggct
ctgcccgagccggtgtgtatggccagcctcattcgggtcgaggccgacgacaatgtgctg
gggcgcgacctgctgcttttctccaaccccaacaccaccaaggggcgccatcacattacg
gtcaaggccagtctcgacggtggggccacctggctccccgagaatcaattgttgctcgac
gaggaggaggggtgggggtacacctgccttacgatggtcgaccgcgaaacggtgggcatt
ctctacgagagcagtgtggcgcacatgacttttcaaacgtttaaactcaccgaactcgtc
cgtaaaaaatag
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