Phocaeicola vulgatus: BVU_3040
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Entry
BVU_3040 CDS
T00546
Name
(GenBank) UvrABC SOS-repair system protein B
KO
K03702
excinuclease ABC subunit B
Organism
bvu
Phocaeicola vulgatus
Pathway
bvu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BVU_3040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvu03400
]
BVU_3040
DNA repair and recombination proteins [BR:
bvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BVU_3040
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BVU_3040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
PIP5K
DUF2785
Kinesin
DUF87
AAA_16
Viral_helicase1
DUF6664
Motif
Other DBs
NCBI-ProteinID:
ABR40677
UniProt:
A6L4R3
LinkDB
All DBs
Position
complement(3847329..3849362)
Genome browser
AA seq
677 aa
AA seq
DB search
MNFELISEYQPTGDQPEAIAQLTEGVLEGVPAQTLLGVTGSGKTFTIANVIKNINKPTLI
LSHNKTLAAQLYGEFKSFFPNNAVEYYVSYYDYYQPEAYLPSSDTYIEKDLAINEEIDKL
RLAATSALLSGRKDVVVVSSVSCIYGMGNPSDFYNNVIEIKKGKLLDRNVFLRRLVDSLY
VRNDIELNRGNFRVKGDTVDIYLAYSDNLLRVMFWDDEIDAIEEIDPISGIRLATFDEYK
IYPANLFMTTKESQLRAIHQIEDDLTKEVAKFEEEGKMYEAKRLYERVTYDMEMIRELGH
CSGIENYSRYFDGRNAGTRPYCLLDFFPDDFLIVIDESHVSVPQIRAMYGGDRARKTNLV
EYGFRMESAFDNRPLKFEEFKELAKQVIYVSATPADYELVESEGIIVEQVIRPTGLLDPV
IEVRPSLNQIDDLMEEIQQRIEKEERVLVTTLTKRMAEELTEYLLRNDIRCNYIHSDVDT
LERVKIMDELRQGVYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNINGKVIMYADRMTDSMKKTIDETNRRREKQLAYNEEHGITPKQIQRARNAALLGNNS
NEVAGTTQGPKAYIEPSSDTTAADPIVQYMTKPQMEKTIERTRKLMQEAAKKLEFIEAAQ
YRDELLKLEDMMKERWG
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgaattgatttccgaataccaacccaccggtgaccaaccggaagctatcgcc
cagctgaccgaaggggtgctggaaggagtccccgcacaaactttattgggggtcaccggg
tccggcaagactttcacgattgcaaatgtaattaaaaacatcaataagcccaccttgata
ttaagccataacaaaacattggcagcccagttatacggagagttcaagagtttctttccc
aataatgctgtggaatactatgtatcttattatgactattaccagccggaagcatatttg
ccgtccagcgacacctatatagaaaaggatctggccattaatgaagagattgacaaattg
cggctggctgccacctctgccctgctgtcgggacggaaggacgtggtggtggtgtcttcc
gtgtcctgcatctacggtatggggaacccgtcggatttctataataacgtaatcgagata
aaaaaaggcaaactgctggacaggaatgtatttttacgccgcttggtggacagcctgtat
gtgcgtaacgacatagaactgaatcgcgggaatttccgcgtaaaaggtgacacggtagac
atttacctggcatatagcgacaatctcctccgggttatgttttgggacgatgaaattgat
gccattgaagagatagaccctatttcgggaatccgtctggcaacttttgatgaatacaaa
atttatccggccaatctttttatgaccaccaaagagagccagttgagagctattcatcag
attgaggacgacttgacgaaagaggtggccaaattcgaggaggaaggaaaaatgtatgag
gcgaaacgactctatgagcgcgtgacatacgatatggagatgattcgcgaactggggcat
tgttcgggcatagaaaattattcccgctactttgacgggcgtaatgcaggtacccgtcct
tactgtctgctggacttctttccggatgatttcctgattgtaatagacgaaagccatgtc
agcgtaccgcaaatacgtgccatgtatggtggtgaccgggccagaaaaaccaatttggtg
gaatatggtttccggatggagtcggcttttgacaaccgtcctctaaaatttgaagagttc
aaggaactggccaaacaagtgatttatgtcagtgccacacctgccgattatgaattggtg
gaaagtgaaggcattatcgttgaacaggttatccgtcctaccggattgctggacccggta
attgaagtacgccccagtctgaatcagattgacgacctgatggaagagatacagcaacgc
atcgagaaagaagaacgtgtactggtgaccacgcttaccaaacgcatggcagaagaattg
accgaatatctgctgcgcaatgacatccgctgcaactacatccacagcgatgtggacact
ttggaacgcgtcaagattatggatgaattacgtcagggcgtttatgatgtactggtgggt
gtgaatttgcttcgtgaaggtctggacttgcccgaagtgtctttggtcgccattctggat
gcagacaaagaagggttcctccgctcccaccgttcgctgacccagacagcaggacgcgcc
gcccgcaatatcaatggaaaagtaatcatgtatgcagaccgcatgacggacagcatgaaa
aaaacgatagacgaaaccaaccgccgtcgtgaaaaacagctggcatataacgaagagcat
ggaatcacccccaaacagatacagcgtgcgcggaatgctgccttgttgggcaacaacagc
aacgaagttgccggaaccactcaaggccccaaggcatacatcgagccatcttccgataca
acggctgccgacccgattgttcagtatatgaccaagccacagatggagaaaacgatagaa
cgtacccggaaactgatgcaggaagctgccaagaagctggaatttatagaagctgcacaa
tacagggatgagctgctgaaactggaagatatgatgaaagagagatggggatag
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