Bradyrhizobium vignae: BRAD3257_5687
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Entry
BRAD3257_5687 CDS
T06968
Name
(GenBank) conserved protein of unknown function
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
bvz
Bradyrhizobium vignae
Pathway
bvz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bvz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BRAD3257_5687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bvz03400
]
BRAD3257_5687
Enzymes [BR:
bvz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BRAD3257_5687
DNA repair and recombination proteins [BR:
bvz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BRAD3257_5687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
SPP96622
UniProt:
A0A2U3Q5E0
LinkDB
All DBs
Position
BRAD3257:5284559..5286001
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AA seq
480 aa
AA seq
DB search
MQYIILDTETDFGGWRKAARTLVLHHVEPRDVTWTVRGGEAELFAPSAPSPILEVNDGTF
NVSAKFVELAKAAILHRDVERFAILYRLLFRLKDNHDLIEVATDPDVAQVTSMARAVYRD
EHKMHAFVRFREIGRERQAHYVAWFEPEHHIVELAAPFFAKRFVDMPWSILTPDLCAHWD
GHALSFTPGVSKSEAPGDDRLEETWRRYYASIFNPARLKVKAMQAEMPKKYWRNLPEASI
IKPLIEDAERMTGAMIANAATDPHKPQKRPEAPMKRKPAADDLEMLREEAAHCRACHLYK
DATQTVFGEGPKNANVMLVGEQPGDKEDLAGHPFVGPAGQMLDRALEEAGVDRKKVYVTN
AVKHFKFVPRGKIRLHQKPNTPEIRACRQWYEREVSAIQPDLIVAMGATAAQSVFGKITP
IGKNRGRLMDLPDGRKALVTVHPSYLLRLPDPESKVLEYQRFVDDLKIAAGLQKKAARAA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacatcatcctcgacaccgaaaccgatttcggcggctggcgcaaagccgcgcgt
acgctcgtactacatcatgtggagccgcgcgatgtcacctggaccgtgcgaggcggcgaa
gcagagttattcgcgccatccgcgccgtctccgatcctcgaggtgaacgacggcaccttc
aacgtatccgcaaaattcgtcgagctcgccaaggccgcaattctgcaccgcgatgtcgag
cgttttgcgatcctctatcgtctgctgttccggctgaaggacaaccacgatctcatcgag
gtcgcaaccgaccctgatgtcgcgcaggtcacttccatggcgagagcggtctatcgcgac
gagcacaagatgcatgccttcgtccgcttccgcgagatcggccgcgaacgccaggcccat
tacgtcgcctggttcgagccggagcatcacatcgtcgagctcgccgcgccgttcttcgcc
aagcgctttgtcgacatgccctggtcgatcctgacgcccgatctatgcgcgcattgggac
ggccacgcgctctcgttcacgccgggtgtcagcaagagcgaggcaccgggcgatgaccgg
ctggaggaaacctggcggcgctactacgccagcatcttcaatccggcccggctcaaggtg
aaggcgatgcaggccgagatgccgaagaaatattggaggaacctgcccgaggcttcgatc
attaagcccttgatagaggacgccgagcgcatgaccggcgccatgatcgccaatgccgca
accgatccgcataagcctcagaagcggccggaggctccgatgaaacgcaagccagctgcc
gacgatctcgaaatgctccgcgaggaagccgcccattgccgcgcctgtcatctctacaag
gatgcgacgcagaccgtgtttggcgagggcccgaagaacgccaacgtcatgctggtcggc
gagcagcccggcgacaaggaagacctcgccggccatccctttgtcggtccggccggacag
atgctcgaccgcgcgctggaggaggccggcgtcgaccgcaagaaggtctatgtcaccaat
gccgtgaagcacttcaaattcgtgccgcgcggaaagatccgcctgcaccagaagccgaac
acacctgagatccgggcgtgccggcaatggtatgagcgggaagtttcggcaatccagccg
gatctcatcgtggcgatgggcgccaccgccgcgcaaagcgtgttcggcaagatcaccccg
atcggcaagaaccgcggccggctcatggaccttcccgacggacgcaaggcgctggtgacg
gtgcatccgtcttatctgctgcggctgcccgatccggaatccaaggtgctggagtatcag
cgctttgtcgatgatttgaagatcgctgccggcttgcagaagaaggctgcacgggccgcc
tga
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