Bacillus mycoides KBAB4: BcerKBAB4_4416
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Entry
BcerKBAB4_4416 CDS
T00642
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bwe
Bacillus mycoides KBAB4
Pathway
bwe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bwe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BcerKBAB4_4416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bwe03400
]
BcerKBAB4_4416
Enzymes [BR:
bwe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BcerKBAB4_4416
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BcerKBAB4_4416
DNA repair and recombination proteins [BR:
bwe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BcerKBAB4_4416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Bac_DNA_binding
AsnA
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ABY45575
UniProt:
A9VJP8
LinkDB
All DBs
Position
complement(4417371..4418201)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVENVRRTLENLVTGKTIEDVVITYPQIVKRPDDAEIFKEMLRGETIENIKRRGK
FLLLYVTNYVIVSHLRMEGKFLLHQEDEPIDKHTHVRFLFTDGTELHYKDVRKFGTMHLF
KKGEELNQMPLADLGPEPFDAELTPQYLQERLQKTNRKIKVVLLDQRLLVGLGNIYVDEV
LFRSQIHPEREAASLTKEEVERIYEAIVTTLGEAVKRGGSTIRTYINSQGQIGSFQELLN
VYGKKGEPCVTCGTILEKTVVGGRGTHYCPICQPRI
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaggttgaaaacgttagacggacgcttgaaaatcttgtaacagga
aaaacgattgaagatgtcgttattacttatccccaaatagtaaaacgaccggatgatgca
gaaatttttaaagaaatgctaagaggcgagacaattgaaaatataaagcgaagaggtaag
tttttgcttttgtatgtaacgaactatgtaattgtttcacatttgcgcatggaaggtaag
tttttacttcatcaagaggatgagccgattgataaacatacgcacgtccgtttcttattt
acagatggaactgaattacattataaagatgtgagaaagtttggtacgatgcatctcttt
aagaaaggtgaagagttgaatcaaatgccccttgctgacttaggcccggagccatttgat
gctgaattgacaccgcagtatttacaagaaagattgcaaaaaacaaatcgtaaaataaaa
gtcgtattattagatcagcgtcttttagtagggcttggaaatatatatgtagatgaagtg
ttattccgttctcaaattcacccagaacgagaagctgcatctttaacaaaagaagaagta
gaaagaatttacgaggcgattgttacaacgctgggcgaagctgttaagcgaggcggaagt
acaattagaacgtatattaattcacaaggacaaattggttcgttccaagaacttctaaat
gtatatgggaaaaaaggagaaccgtgtgttacttgcggtacgatattagagaaaacagtt
gttggcggaagaggaacgcattactgcccgatttgtcagccgagaatatag
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