Bacillus weihaiensis: A9C19_02275
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Entry
A9C19_02275 CDS
T04822
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
bwh
Bacillus weihaiensis
Pathway
bwh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bwh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A9C19_02275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bwh03019
]
A9C19_02275
03016 Transfer RNA biogenesis [BR:
bwh03016
]
A9C19_02275
Enzymes [BR:
bwh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A9C19_02275
Messenger RNA biogenesis [BR:
bwh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A9C19_02275
Transfer RNA biogenesis [BR:
bwh03016
]
Prokaryotic type
tRNA degradation factors
A9C19_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
BSD
MarR_2
RNase_II_C_S1
DUF3592
Motif
Other DBs
NCBI-ProteinID:
APH06920
UniProt:
A0A1L3MXA9
LinkDB
All DBs
Position
500969..503269
Genome browser
AA seq
766 aa
AA seq
DB search
MKEEAYKPLTVQELEEAFGIEDSAEFKDFVKALVVMEDQGLVVRTRSNRYGLPEKMNLLK
GKLIGHAKGFAFVDPEDPELDDVFIPPTELKTAMHGDVVLVRVSPKGTGSRQEGTIIRIL
ERGVKEVVGTYTESKNFGFVIPDDKKIANDIFIPKNASGGAVEGHKVVVKLTTYPEGRMS
AEGEVVDILGHKNDPGVDILSVIHKHGLPGPFPVEALEQANDVPETINEEDLKDRRDLRN
ETIVTIDGADAKDLDDAVTVTKLDNGNYKLGVHIADVSHYVTENSPIDREAVDRGTSVYL
VDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMEVDSEGQVVNHEIFQSVIKTTERMTYTD
VNKILEEKDEALRQKYEKLVPMFEEMGELASVLRTKRMNRGAIDFDFKEAKVLVDAKGQP
TDVVLRERSVAERLIEEFMLLANETVAEHFHWMNVPFIYRIHEEPNAEKLQRFLEFITNF
GYTVKGAANEIHPRALQNIIEEVAGKPEETVISTVMLRSMKQAKYDPESLGHFGLSTEFY
THFTSPIRRYPDLIVHRLIRTYLIEGKVDEQTRSSWAESLPVIAEHASNMERRAVEAERE
TDELKKAEYMLDKIGEEYDGMISSVTNFGMFVELPNTIEGLIHVSYLTDDYYRYDERHYA
MIGERTGNVYRIGDEITVRVVNVNKDERAIDFEVVGMKGTRRRSVKETPKVIVAGKGRKP
SNLNRNGNKKKSEDDNTGEWSTRPPRKKKKKTYDNAPKAKRKKKKR
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagaggcgtacaagccgttaacagtacaggagcttgaagaagcattcggtatt
gaggattcagcggaattcaaggatttcgtaaaagcattagtggtgatggaggaccaaggg
ttagtcgtacgaacacgaagtaatcgctatgggctaccggagaaaatgaacctccttaaa
gggaaattaattggacatgcgaagggctttgctttcgttgatcctgaagatccagagtta
gatgatgtgtttattccgccaaccgagctaaaaacagcgatgcacggggatgttgttctt
gttagggttagccctaaaggtactggctcaagacaggaaggcacaatcattcgaatttta
gagcgaggcgtaaaagaagtcgttggaacctatacagaaagtaaaaactttggcttcgtt
attccagatgataaaaagattgccaacgatatttttattccgaaaaacgcatcaggcggt
gccgtagagggacataaggttgttgtgaaactaaccacgtatccagagggacgcatgagt
gctgagggggaagttgtcgatattcttggtcataaaaatgatccaggggttgatatcctg
tctgttatccacaagcatgggctgccgggtcctttccctgttgaggcacttgaacaagca
aatgatgttccagaaacaatcaatgaggaagatttaaaggatcgccgagatcttcgcaat
gagactattgtgaccattgatggagcagatgcaaaggatttagatgacgctgttacagtg
acgaagcttgataatggaaattataagctaggtgttcacattgctgacgttagccattat
gtaacagagaattcaccaattgatcgcgaggcagtggatcgtggaacaagtgtttattta
gtcgatcgcgtgattccaatgatcccacaccgtctttctaatggaatttgttccttaaat
ccgaaagttgatcgtttaacacttagctgtgagatggaagtggactctgagggtcaagtt
gtcaatcatgaaatcttccaaagtgtgattaagacaacagagcgaatgacgtatacggat
gtaaacaaaattctagaggagaaagatgaagctcttcgtcaaaaatatgaaaagcttgtc
ccaatgtttgaagaaatgggtgagcttgcaagtgttttacgtacaaaacgtatgaaccgt
ggagccattgactttgattttaaagaagcgaaggtactagtagatgctaaaggtcaaccg
actgatgtagttctccgagaacgttcagtagctgagcgattaattgaggaatttatgctt
cttgctaatgaaacagtagctgagcatttccattggatgaatgtaccgtttatttatcgt
atacatgaggagccaaatgctgaaaaactacaacgctttttagaatttatcacgaacttc
ggctataccgttaaaggtgctgcaaatgagattcacccaagagcccttcaaaatattatt
gaggaagtagcgggtaagcctgaggaaactgtcatttcaacggttatgcttcgctcaatg
aagcaggcaaaatatgatccggaaagcttaggacactttggattatcgacggaattctat
acacactttacatcaccaattcgtcgttaccctgacttaattgttcatcgactgattcgt
acgtatttaattgaaggaaaagttgatgaacaaacccgttcaagctgggcagaaagctta
ccagtgattgctgagcacgcatctaatatggaaagacgagcagttgaagcagagcgtgaa
acagatgaactgaaaaaagctgaatatatgcttgataaaattggagaagaatacgatgga
atgattagttctgtcacaaactttgggatgtttgttgagcttccaaacacgattgaaggt
ttgattcacgttagttacttaacagatgactattaccgatatgatgagcgccactatgcg
atgattggtgaacgtactggaaatgtttatcgtattggtgacgaaattaccgtccgtgta
gttaacgtgaataaggatgagcgtgccattgattttgaagtagtcggtatgaagggaaca
agacgccgatcagtaaaagaaacaccaaaagtcattgttgctggaaaaggtcgtaaacca
tcaaatctaaaccgtaacggcaataagaaaaagtcagaagatgacaacacaggtgagtgg
tcaacacgtcctccacgtaaaaagaaaaagaaaacgtatgataatgcacctaaagctaag
cggaaaaagaagaaacgctaa
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