Paraburkholderia xenovorans LB400: DR64_5163
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Entry
DR64_5163 CDS
T03290
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb03030
DNA replication
bxb03410
Base excision repair
bxb03420
Nucleotide excision repair
bxb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DR64_5163 (polA)
03410 Base excision repair
DR64_5163 (polA)
03420 Nucleotide excision repair
DR64_5163 (polA)
03440 Homologous recombination
DR64_5163 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bxb03032
]
DR64_5163 (polA)
03400 DNA repair and recombination proteins [BR:
bxb03400
]
DR64_5163 (polA)
Enzymes [BR:
bxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DR64_5163 (polA)
DNA replication proteins [BR:
bxb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DR64_5163 (polA)
DNA repair and recombination proteins [BR:
bxb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DR64_5163 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DR64_5163 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AIP35253
UniProt:
Q13RX8
LinkDB
All DBs
Position
2:complement(802511..805252)
Genome browser
AA seq
913 aa
AA seq
DB search
MPEERSLEGKTLLLVDGSSYLYRAYHAMPDLRGPDGGPTGALYGMINMLRRMRKEVTAEY
SACVFDAKGKTFRDDWYADYKANRPSMPDDLSRQIEPIHVAVRALGWPLLMIEGVEADDV
IGTLSTEAEKRGMNVIVSTGDKDLAQLVSDHVTLINTMTNEKLDRAGVLAKFGVPPERII
DYLSLVGDTVDNVPGVEKCGPKTAVKWLTQFDSLDGIVAHADEIKGAVGDNLRRALDFLP
MAKKLVTVERNCDLTDHIVSIGESLQSQPESRAELREVFTRHGFKTWLREVEIADAVEGP
ETDVPPALSVDHERHYDTVQTWEQFDAWLGKINAAELTSFDTETTSLDPMIAQIVGLSLS
VEAGRAAYVPLAHRGPDAPVQLPRDEVLARLKPWLESAGHKKVGQHLKYDEQVLANYGIE
MRGIEHDTLLQSYVVESHRTHDMDSLALRHLGVKTIKYEEVAGKGAGQIGFDEVALDKAA
EYAAEDADITLRLHQVLYPQVAAEKTLQYVYHDIELPTSRVLRKMERTGVLIDSEKLRQQ
SSEIATRLIQLESEAYVLAGGEFNLGSPKQIGQIFFEKLELPVVKKTPSGAPSTDEEVLQ
KLAEDFPLPKILLEHRGLSKLKSTYTDKLPRMVNATTGRVHTNYAQAVAVTGRLASNDPN
LQNIPVRTGEGRRIREAFIAPAGHKLVSADYSQIELRIMAHISGDESLLHSFSQGEDIHR
ATAAEIFSVTPLEVSNDQRRVAKVINFGLIYGMSSFGLASNLGITRDAAKLYIDRYFARY
PGVARYMDETRVSAKAKGYVETVFGRRLWLPEINGGNGPRRQAAERAAINAPMQGTAADL
IKLSMIAVQKWIEESKIGTRMIMQVHDELILEVPDAELSDVRKRLPELMCGVADLKVPLV
AEVGAGLNWEEAH
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagaacgaagccttgaaggtaagaccctgctattggtcgacggttcgagttat
ctgtaccgggcctaccatgcgatgcctgatctgcgcggccccgacggtggtccgacaggt
gcgctctacgggatgatcaacatgctgcggcgcatgcgcaaggaagtcacagcagagtat
agcgcgtgcgtgttcgacgccaagggcaaaacgttccgcgacgactggtatgccgactac
aaggcgaaccgtccgtccatgccggacgatctctcgcgtcagatcgagccgattcatgtg
gccgtgcgcgcgctcggctggccgctgctgatgatcgaaggcgtcgaggccgacgacgtg
atcggcacgctcagcaccgaggcggaaaagcgcggcatgaacgtgatcgtgtcgactggg
gacaaggatctggcgcagctcgtgtcggatcatgtcaccctcatcaatacgatgaccaac
gaaaaactcgaccgcgccggcgtgctcgccaagttcggcgtgccgccggagcgcatcatc
gactacctgtcgctggtcggcgataccgtcgacaacgtgccgggcgtcgagaaatgcggg
ccgaaaaccgcggtcaaatggctgacgcaattcgactcgctggatggcatcgtcgcacat
gcggacgaaatcaaaggtgcggtaggagacaatctgcgccgagcgctcgattttctgcca
atggcgaagaaactcgtcaccgtcgagcgtaattgcgacttgaccgaccatatcgtgtcg
atcggggaaagcctgcaaagccagccggaatcgcgcgcggaactgcgcgaggtgttcacg
cgccacggcttcaagacatggctgcgcgaagtggaaatcgcggatgcggtggaaggtccg
gaaaccgacgtgccgccggctttgtccgtggatcacgagcggcattacgacaccgtgcag
acgtgggagcagttcgacgcgtggctcgggaagatcaatgcggccgaactcacttccttc
gataccgaaaccacgtcgctcgatcccatgatcgcgcagatcgtggggctgtcgttgtcg
gtcgaggccggccgtgcggcttatgtgccgctcgcgcatcgcggcccggacgcgcccgtg
caattgccgcgcgacgaagttctcgccaggctcaagccgtggctggaaagcgccgggcac
aagaaggtcggtcagcatctcaagtacgacgagcaggtgctggcgaactacggcatcgaa
atgcgcggtatcgaacacgacacgctgctgcaatcgtacgtggtcgaatcgcatcgcacg
cacgacatggacagcctcgcgctgcgccatctcggcgtgaagacgatcaagtacgaagag
gtggcgggcaagggcgcggggcagatcggtttcgacgaagtcgcgctggacaaggccgcg
gaatacgcagcggaagacgccgacatcaccttgcggctgcaccaggtgctgtacccgcaa
gtggcggcggagaagaccctccagtacgtttatcacgacatcgagttgcccacctcgcgc
gtgctgcggaagatggaacgtaccggcgtgctgatcgattcggagaagctgcgtcagcaa
agcagcgaaatcgccacgcgtctgatccagttggaaagcgaggcgtatgtgctggccggc
ggcgaattcaatctgggttcgcccaagcagatcgggcagatcttcttcgagaagctggag
ttgccggtggtcaagaagaccccgagcggcgcaccctccaccgacgaagaagtgctgcaa
aagctcgccgaagattttccgctgccgaagattctgctcgaacaccgtggcctgtcgaag
ctgaaatcgacctacacggacaagctgccgcgcatggtcaacgctaccacgggccgcgtg
catacgaactacgcgcaggccgtggcggtcacggggcggctcgcgtcgaacgacccgaac
ctgcagaacattcccgtgcgcaccggcgaaggccgccgtattcgcgaagcgtttattgca
ccggccggacacaagctggtctccgcggattattcgcagatcgaattgcgcatcatggcg
cacatttcgggcgacgaatcgttgctgcactcgttttcgcaaggtgaagacattcaccgc
gccaccgcggcggaaatcttcagcgtgacgccgctcgaagtctcgaacgatcaacggcgc
gtagccaaggtcatcaactttggcctgatctacggcatgagttcgttcgggctcgcctcg
aacctcggcatcacgcgcgacgccgccaagctctatatcgaccgctatttcgcacgttac
cctggcgtggcgcgttatatggacgaaacgcgcgtgagcgcgaaggccaaaggctacgtc
gaaacggtgttcggccgccgcctgtggctgcccgagatcaacggcggcaatggtccgcgc
cgccaggccgccgagcgcgccgcgatcaacgcgccgatgcaaggcacggcggccgacctg
atcaaactctcgatgatcgcagtgcagaagtggatcgaagagtcgaagatcggcacccgc
atgatcatgcaggtgcacgacgaattgattctcgaagtaccggacgcggaattgtccgac
gtgcgcaagcgcctgcccgagttgatgtgcggcgtcgccgacctgaaagtgccgctggtc
gccgaagtgggtgcaggcctgaactgggaagaagcgcattga
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