Paraburkholderia xenovorans LB400: DR64_7276
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Entry
DR64_7276 CDS
T03290
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
bxb
Paraburkholderia xenovorans LB400
Pathway
bxb00250
Alanine, aspartate and glutamate metabolism
bxb00310
Lysine degradation
bxb00350
Tyrosine metabolism
bxb00650
Butanoate metabolism
bxb00760
Nicotinate and nicotinamide metabolism
bxb01100
Metabolic pathways
bxb01120
Microbial metabolism in diverse environments
Module
bxb_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
bxb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
DR64_7276 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
DR64_7276 (gabD)
00310 Lysine degradation
DR64_7276 (gabD)
00350 Tyrosine metabolism
DR64_7276 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
DR64_7276 (gabD)
Enzymes [BR:
bxb01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
DR64_7276 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
DR64_7276 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
DR64_7276 (gabD)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AIP35322
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Position
2:3199819..3201288
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AA seq
489 aa
AA seq
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MPSLQEPSLFRQECYIAGEWIESDPMARIDVVNPANGLKIGTVPRATLADVRTCIDAAER
ALPAWSGKTGKERAAILRRWYELMLQHQEDLAVIMTCEQGKPLAESRGEIVYAASFLEWF
AEEAKRVYGDTIPTPASDRRIVVLKQPIGVCAAITPWNFPAAMLTRKIGPALAAGCTMVL
KPASQTPFSALALCVLAERAGVPAGVLSCVTGKASMIGDEFCRNPAVRKLSFTGSTEIGK
LLLQQCASTVKKTSMELGGNAPFIVFDDADLDAAVVGAIAAKFRNAGQTCVCVNRFLVQD
TVHDAFVEKLSTAIAALKVGDGLDAGTRIGPLIDSKAVEKAREHVDDAIARGATVVTGGS
GHALGGNYFEPTLLTGASKDMKIFREETFGPVAPVFRFRTEEEAIQLANDTEFGLASYFY
GRDIGRVWRVAEALEYGMVGINEGLISTEVAPFGGVKESGLGREGSKYGIEDYLEVKYLC
MGGLAARPV
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccttgcaggagccgtccctctttcgtcaggaatgctacattgccggcgaatgg
attgaatccgatccgatggcccggatcgacgtcgtcaatccggccaacggcttgaagatc
ggtacagtgccgcgcgccacgcttgccgatgtgcgaacctgcatcgacgccgccgaacgc
gcgctgcccgcgtggtccggaaagacgggcaaggaacgcgcagcgatcctgcggcgctgg
tacgaactgatgctgcaacatcaggaagaccttgcggtcatcatgacctgcgagcagggc
aagcctttagccgaaagccgcggcgaaatcgtgtacgcggcgtcgttcctggaatggttc
gccgaggaagcgaagcgtgtgtacggcgatacgatcccgacgccggcatccgaccggcgc
attgtcgtgctgaaacagccaatcggtgtgtgcgccgccattacgccgtggaatttcccc
gcagccatgctcacgcggaagatcggccccgcactcgccgccggttgcacgatggtcctc
aagcccgcgagccagactcccttctccgcgctggcgctgtgcgtgctggccgagcgtgcc
ggcgtgcccgctggtgtgctgtcctgtgtgacaggaaaggcctcgatgatcggcgacgag
ttctgccggaacccggcagtgcgcaagctctccttcaccggctcgaccgaaataggcaag
ctgctgcttcagcaatgcgccagcacggtgaaaaaaacgtccatggaactgggcggcaat
gcgcccttcatcgtattcgacgatgccgatctcgacgcagccgtcgtaggcgccatcgcg
gccaagttccgcaatgccgggcaaacctgcgtctgcgtgaaccgctttcttgttcaggac
actgtccacgatgctttcgtcgagaagctgtccacggcgatcgcggcgctgaaggtggga
gacggcctcgatgccggcacacggatcggtccgctcatcgacagcaaagcggttgagaag
gcgcgcgagcacgtcgatgacgccatcgcaaggggcgcaacggtggtgacgggaggctcg
ggtcacgcgctcggaggcaattattttgaacccacgttgctaaccggcgcttcgaaggac
atgaagatcttccgcgaagagaccttcggccccgtggcgcccgtgttccgcttcagaacc
gaggaagaagcgatccagctcgccaacgataccgagttcggtctcgcctcctatttctac
ggacgcgacatcggcagagtgtggcgcgtggccgaggcgctcgaatacggcatggtcggc
atcaacgaagggctgatctccacagaagtagcgccctttggcggcgtaaaggaaagcggt
cttgggcgggaaggttcaaagtacggcattgaagactatctggaagtcaaatatctctgt
atgggcggcctggccgcgcgcccagtctga
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