KEGG   Bacillus amyloliquefaciens XH7: BAXH7_01346Help
Entry
BAXH7_01346       CDS       T01836                                 

Gene name
yoqV
Definition
(GenBank) hypothetical protein
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bxh  Bacillus amyloliquefaciens XH7
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:bxh00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    BAXH7_01346 (yoqV)
   03410 Base excision repair
    BAXH7_01346 (yoqV)
   03420 Nucleotide excision repair
    BAXH7_01346 (yoqV)
   03430 Mismatch repair
    BAXH7_01346 (yoqV)
Enzymes [BR:bxh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     BAXH7_01346 (yoqV)
    6.5.1.6  DNA ligase (ATP or NAD+)
     BAXH7_01346 (yoqV)
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     BAXH7_01346 (yoqV)
DNA replication proteins [BR:bxh03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    BAXH7_01346 (yoqV)
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     BAXH7_01346 (yoqV)
DNA repair and recombination proteins [BR:bxh03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BAXH7_01346 (yoqV)
   NER (nucleotide excision repair)
    Other NER factors
     BAXH7_01346 (yoqV)
   MMR (mismatch exicision repair)
    Other MMR factors
     BAXH7_01346 (yoqV)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
LinkDB All DBs
Position
complement(1273498..1274310)
Genome map
AA seq 270 aa AA seqDB search
MFVSPMLLHSIKEPFDDDDYITELKFDGIRLILSKFNDQIKLYTRHNNEVTSKFPELLDL
DIPNGTVLDGEIIVATPGGAPDFEAVMERFMSKKSAHKVVYCVFDVVYIDGHSIANKPLT
ERKSMLSDLNLDHDNVFVIEGLQGNGLAYFNLAKEKNLEGIVLKKANSPYEINKRSHSWL
KVINYDYTDVLITGYTKEDIKFLLSYPDGTTAGFMEFMPNAERSKFHSMKQVKSESDEYV
FVEPILCKVKHRFKTKHGKLRIPSFESWRV
NT seq 813 nt NT seq  +upstreamnt  +downstreamnt
ttgtttgtatcgccaatgttattgcattcaatcaaagaaccatttgatgacgatgattat
attaccgagctgaagtttgatggaattagactgatcctctccaagtttaatgatcagata
aagctttatactcgtcacaacaatgaagtaacaagcaagttcccagaactgttggatctt
gatatacccaatggaactgttttagacggtgaaatcattgtagctaccccaggcggtgcc
cctgatttcgaagcagtcatggaacgctttatgtctaagaaatcagctcataaggtggtt
tactgtgtattcgatgtagtttatattgatggacattcaatcgctaataagccgctcact
gaacgtaagagcatgctttcagacctaaaccttgaccacgataatgtctttgtgatcgaa
ggcctgcaaggaaacggattagcttacttcaatctggccaaagaaaagaatttagaggga
atcgtactaaagaaagctaactccccttatgaaatcaataaacgttcccatagctggctg
aaagtgattaattatgattacacagatgtgcttatcactggctacaccaaagaggatata
aagtttcttctgtcttatcctgatggtacaacagctggatttatggaattcatgccgaat
gcggaacgaagtaagttccactctatgaaacaagtaaagtctgaatctgatgaatatgta
tttgtagaaccgatcttatgtaaggttaaacacagatttaagactaagcatggcaaactc
cgtataccttcctttgaatcctggagagtctaa

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