Burkholderia sp. YI23: BYI23_A020010
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Entry
BYI23_A020010 CDS
T01711
Name
(GenBank) NAD-dependent formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
byi
Burkholderia sp. YI23
Pathway
byi00630
Glyoxylate and dicarboxylate metabolism
byi00680
Methane metabolism
byi01100
Metabolic pathways
byi01120
Microbial metabolism in diverse environments
byi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BYI23_A020010
09102 Energy metabolism
00680 Methane metabolism
BYI23_A020010
Enzymes [BR:
byi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
BYI23_A020010
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4
Fer4_21
Fer4_10
Fer4_6
Fer4_9
Fer4_15
Fer4_2
Fer4_4
Fer4_16
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
AET89839
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All DBs
Position
1:2247263..2250184
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AA seq
973 aa
AA seq
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MSNTINGCGSGNCACKSAASVQRRDPFDDTDYGTPLRHADIDVTLEIDGESVTVPAGTSV
MRAAIEAGVNVPKLCATDSLEPWGSCRLCLVEIEGKRGYPASCTTPVEAGMKVRTQSDKL
QSLRKNVMELYISDHPLDCLTCPANGDCELQDMAGVVGLREVRYGYEGENHLKDKKDESN
PYFTYDPSKCIVCNRCVRACEETQGTFALTIAGRGFESRVAASENVPFMESECVSCGACV
AACPTATLQEKTVIMLGQAEHSAVTTCAYCGVGCSLKAEMKGNTVVRMTPNKNGQANEGH
ACVKGRFAWGYATHKDRIKKPMIRAKITDPWREVSWDEAINYAASEFRRIQDKYGRDSIG
GITSSRCTNEETYLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKTTLGESAGTQTFASVE
QSDVIIVIGANPTDGHPVFGSRLKRRVREGAKLIVIDPRRIDIVDTPHVKAQYHLPLRPG
TNVAMLNSLAHVIVTEGLLKEDFIAERCETRAFGQWREFVAREENSPEAMEATTGVPAQA
VREAARVYATGGNGAIYYGLGVTEHAQGSTAVIGIANLAMATGNVGREGVGVNPLRGQNN
VQGSCDMGSFPHELPGYRHISDAATRSLFEEAWDVKLQPEPGLRIPNMFDAALHGSFMGL
YCQGEDIVQSDPNTQHVGAALAAMECIVVQDIFLNETAKYAHVLLPGSTFLEKDGTFTNA
ERRISRVRKVMPPLAGFSDWEVTIKLARALGYEMNYANPSEIMDEIARLTPTFHGVSYDR
IDELGSIQWPCNEKAPDGTPTMHIDEFVRGKGRFVITKFVATPEKVTRKYPLLLTTGRIL
SQYNVGAQTRRTENSQWHDEDRLEIHPVDAEDRGIKMNDWVGIESRAGQTVLRAKISERM
QPGVVYTTFHFPESGANVITTDSSDWATNCPEYKVTAVQVMPVEQPSQWQQDYSRFNSQQ
LELLNLATTSSGK
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacaccatcaacggctgcggctccggcaactgcgcgtgcaagagcgcggcatcc
gtgcagcgccgcgatccgttcgacgacaccgactacggcacgccgctgcgtcacgccgat
atcgacgtgacgctcgagatcgacggcgaaagcgtgaccgtgcccgcgggcacgtcggtg
atgcgcgccgcgatcgaagccggcgtcaacgtgccgaagctctgcgccaccgattcgctc
gaaccgtggggctcgtgccgtctgtgcctcgtcgagatcgaaggcaagcgcggctatccg
gcttcgtgcacgacgcccgtcgaagcgggcatgaaagtgcgcacgcaaagcgacaagctg
cagtcattgcgcaagaacgtgatggagctttacatctccgatcacccgctcgactgtctc
acctgccctgccaacggcgactgcgaactgcaggatatggcgggcgtcgtcggcttgcgc
gaagtgcgttacggctatgaaggcgagaaccatctgaaggacaagaaggacgaatcgaat
ccgtacttcacctacgatccgtccaagtgcatcgtctgcaaccgctgcgtgcgcgcgtgc
gaagagacgcaaggcaccttcgcgctgaccatcgccggacgcggtttcgaatcgcgcgtg
gcggcgagcgagaacgtgccgttcatggaatcggaatgcgtgtcgtgcggcgcgtgcgtc
gccgcgtgcccgaccgcgacgctgcaggaaaagaccgtcatcatgctcggccaggcggaa
cattcggccgtgacgacctgcgcctattgcggcgtcggctgctcgctcaaggccgagatg
aagggcaacaccgtcgtgcgcatgacgccgaacaagaacggccaggcgaacgaaggccac
gcgtgcgtgaagggccgcttcgcatggggttacgcgacgcacaaggaccgcatcaagaag
ccgatgatccgcgcgaagatcaccgacccgtggcgcgaagtgtcgtgggacgaagcgatc
aactacgcggcaagcgaattccgccgcattcaggataaatacggacgcgattcgatcggc
ggcatcacgtcgtcgcgctgcacgaacgaagaaacgtatctcgtgcagaagctcgtgcgc
gccgcgttcggcaacaacaacgtcgatacctgcgcgcgcgtgtgccactcgccgacgggt
tacggcctcaagacgacgctcggcgaatccgccggcacgcagaccttcgcatcggtcgag
cagtcggatgtcatcatcgtgatcggcgcgaatccgaccgacggccatccggtcttcggc
tcgcgtctgaagcgccgcgtgcgtgaaggcgcgaagctcatcgtgatcgatccgcgccgc
atcgatatcgtcgatacgccgcacgtgaaggcgcagtatcacctgccgctgcgccccggc
acgaacgtcgcgatgctcaattcgctcgcgcacgtgatcgtcacggaaggcttgctgaag
gaagacttcatcgcggaacgctgcgagacgcgcgccttcggtcaatggcgcgagttcgtc
gcgcgtgaagagaattcgcccgaagcgatggaagcgaccaccggcgtgcccgcgcaggcg
gtccgcgaggccgcgcgcgtctatgcgacgggcggcaacggcgcgatctactacggcctc
ggcgtcacggaacacgcgcaaggctcgacggccgtcatcggcattgcgaacctggcgatg
gccaccggcaacgtcggccgcgaaggcgtcggcgtgaatccgctgcgcggccagaacaac
gtgcagggctcgtgcgacatgggctcgttcccgcacgaactgccgggctatcgccatatc
agcgatgccgccacgcgctcgctcttcgaagaagcgtgggacgtgaagctccagccggaa
ccgggcctgcgcattccgaacatgttcgacgccgcgctgcacggcagcttcatgggcctc
tactgccagggcgaggacatcgtccagtcggacccgaacacgcagcatgtcggcgcagcg
ctcgcggcgatggaatgcatcgtcgtgcaggacatcttcctcaacgaaacggcaaagtac
gcgcacgtgctgctgccgggctcgaccttcctcgagaaggatggcaccttcaccaacgcc
gagcgccgcatctcgcgcgtgcgcaaggtgatgccgccgctcgcgggcttttccgactgg
gaagtgacgatcaagctcgcacgcgcactcggctacgagatgaattacgcgaatccgtcg
gaaatcatggacgaaatcgcgcgtctcacgccgacgttccacggcgtctcctacgatcgc
atcgacgagctcggcagcattcagtggccgtgcaacgagaaagcgccggacggcacgccg
acaatgcacatcgacgaattcgtgcgcggcaagggacgcttcgtcatcacgaagttcgtc
gcgacgccggagaaggtcacgcgcaagtatccgctcctgctcacgaccggccgcatcctg
tcgcagtacaacgtgggcgcgcagacgcgccgcaccgagaactcgcaatggcacgacgaa
gaccggctggagattcatccggtggacgcggaagatcgcggcatcaagatgaacgactgg
gtcggcatcgaatcgcgcgcggggcaaaccgtgttgcgggcgaagatttcggagcgcatg
cagccgggcgtcgtctacacgaccttccacttcccggaatcgggcgcgaacgtcatcacg
acggattcgtccgactgggcgaccaactgtccggagtacaaggtgacggcggttcaggtg
atgccggtcgaacagccgtcgcaatggcagcaggactactcgcgcttcaattcgcagcag
ctcgaactgctcaatctcgccacgacctcttcgggaaaataa
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