Burkholderia sp. YI23: BYI23_A020560
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Entry
BYI23_A020560 CDS
T01711
Symbol
capD
Name
(GenBank) polysaccharide biosynthesis protein CapD
Organism
byi
Burkholderia sp. YI23
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
CoA_binding_3
GDP_Man_Dehyd
3Beta_HSD
CoA_binding
NAD_binding_4
GFO_IDH_MocA
adh_short
PglD_N
KR
NAD_binding_10
TrkA_N
DAO
Pyr_redox_2
Methyltransf_33
Motif
Other DBs
NCBI-ProteinID:
AET89894
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Position
1:complement(2312570..2314474)
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AA seq
634 aa
AA seq
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MNRIKASWLSAGAFFFDLVAVAGSWLAAYVIRFNGAVPQDFRHGALMALFWVLPVYGIVF
RVFGLYRGMWVFASLPDLMRISKSIVVGALVVMVGAVMSQPMPIIPRSVLIVSPLLLFLA
MGGARALYRAGKEFYLYGGLVGQGKPVIVLGAGTAGAMLARELARSSEWRLVGLLDDDPA
KQGREVLGHKVLGSFGDLPRFAEQLKTDYVIIAIPSASVAEQRRVATLCVRAGVKVMVLP
ALSPLTEGTNFLSRVRQIDLEDLLGREPVKIDMPHVEQLLHGRVVMVTGGGGSIGSELCR
QILRFSPAQLIAYDLSEYAMYRLIEELHEKFPECSVIPVVGDAKDSLLLDQTMARFTPHI
VFHAAAYKHVPLMEEQNAWQAVRNNVLGTLRVARAAIRHDVRHFVLISTDKAVNPTNVMG
ASKRLAEMACQALQQSAPRTQFETVRFGNVLGSAGSVIPKFQQQIAKGGPVTVTHPEITR
FFMTIPEAAQLVLQASSMGRGGEIFILDMGQPVKIVDLARDLIRLYGFSEEQIRIVFTGL
RPGEKLYEELLADDETTTRTPHPKLRIAQARGVPDHFIDELLPWLMQHRVLSDDEVRRDL
RRWVPEYQTAALPVLQSVASAQAAQTARQHGAAG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgaataaaagcatcgtggctgtcggcgggggcattcttcttcgatctggtggcg
gtcgccgggtcatggctcgccgcctatgtgatccgcttcaacggggccgtgccgcaggat
ttccgccacggcgcgctcatggcgctcttctgggtgctgccggtctacggcatcgtgttc
cgcgtcttcggcctttatcgcggcatgtgggtgttcgcgagcctgccggacctgatgcgc
atctccaagtccatcgtggtgggcgcgctcgtggtcatggtgggcgcggtgatgtcgcag
cccatgccgatcatcccgcgctcggtgctgatcgtctcgccgcttttgctgttcctcgcg
atgggcggcgcgcgcgcgctttatcgggcgggcaaggagttctatctgtacggcgggctc
gtcggccagggcaagcccgtgatcgtgctcggcgcgggcacggcgggcgcgatgctcgcg
cgcgagctggcgcgttcgagcgaatggcgtctcgtcggcctgctcgacgacgatcccgcg
aagcagggccgcgaagtgctcgggcacaaggtactcggctcgttcggcgatttgccgcgc
tttgccgagcaactgaagacggattacgtgatcatcgcgattccgtcggcctcggtggcc
gagcagcggcgcgtggccacgctgtgcgtgcgcgccggcgtcaaggtgatggtgctgccc
gcgctctcgccgctcaccgaaggcacgaactttctgtcgcgcgtgcgccagatcgatctc
gaagatttgctcggccgcgagccggtgaagatcgacatgccgcacgtcgagcaactgctg
cacgggcgcgtggtgatggtgacgggcggcggcggctcgatcggctcggaactctgccgc
cagattctgcgcttctcgccggcgcaactaatcgcctacgatctctccgaatacgcgatg
taccggctcatcgaagagctgcacgagaagtttccggagtgctcggtgatcccggtcgtc
ggcgatgccaaggattcgctgctgctcgatcagaccatggcgcgctttacgccgcacatc
gttttccatgcggcagcctacaagcacgtgccgctgatggaagagcagaacgcgtggcag
gcggtacgcaacaacgtgctcggcacgctgcgcgtcgcgcgcgcggcgatccgccacgac
gtgcgccatttcgtgctgatctccaccgacaaggccgtcaacccgaccaacgtgatgggc
gcctccaagcgtctcgccgagatggcctgtcaggcgctgcagcagtccgcgccgcgcacg
cagttcgaaaccgtgcgctttggcaacgtgctcggcagcgcgggcagcgtgattccgaag
ttccagcagcagatcgcgaagggcggtccggtgacagtcacgcatccggaaatcacacgc
ttcttcatgacgattcccgaggccgcgcaactggtgctgcaggcgtcgagcatggggcgc
ggcggcgaaatcttcattctcgacatgggtcagcccgtgaagatcgtcgatctcgcgcgc
gacctgattcgtctctacggcttctcggaagagcagattcgcatcgtgttcacgggtttg
cggccgggcgaaaagctgtacgaagaactgctggcggacgacgaaaccaccacgcgcacg
ccgcatccgaagctgcgcatcgcgcaggcgcgcggcgtgccggatcatttcatcgacgaa
ctgctgccgtggctcatgcagcatcgcgtgttgtcggacgacgaagtgcgccgcgacctg
cgccgctgggtgccggagtatcagacggcggcattgcccgtgctgcagagcgtggcgagc
gcgcaagccgcgcagacggcgcgccagcacggcgcggcgggctga
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