Burkholderia sp. YI23: BYI23_C008560
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Entry
BYI23_C008560 CDS
T01711
Name
(GenBank) ABC transporter
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
byi
Burkholderia sp. YI23
Pathway
byi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
byi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BYI23_C008560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
byi02000
]
BYI23_C008560
Transporters [BR:
byi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BYI23_C008560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA
AAA_29
AAA_16
Mg_chelatase
AAA_22
nSTAND3
nSTAND1
NACHT
AAA_25
AAA_30
RsgA_GTPase
T2SSE
Rad17
TsaE
AAA_5
NB-ARC
PduV-EutP
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AET93002
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Position
3:complement(989007..990074)
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AA seq
355 aa
AA seq
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MSSKLEAIGIAKRYGDAVALEPTDLAVQAGEFLTLLGPSGSGKTTLLQMISGLVAPSAGR
IEIDGRDVTHVEPGKRGIGMVFQSYALFPHMSVWDNVAYGLRMRRKSREDVRAAVDDALA
MVRMSEFAKRFPKELSGGQQQRIALARCFAYRPSVILLDEPLGALDKKLREHMQSEIRRL
HKELGATFVYVTHDQDEALTLSDRICLMNQARIEQVGTPADLYDRPATRFAAGFIGHSNL
LEGALDETRGARGEPILLAAGGRIPLPMNAGAPAASAARHTLLLRPEAPRLVEPQDGFVD
GTIADVVFFGSDTRVQLSMNDGSELTVRCERSLSPRIGDRVGLVWDPYRTTLLHA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgaaactcgaagcgatcggcatcgcgaagcgctatggcgatgcggtcgcgctg
gaaccgacggatctcgccgtgcaggcgggcgaattcctgacgctgctcggtccctcgggt
tcgggcaagaccacacttttgcaaatgatttcggggctcgtcgcgccgagcgcggggcgc
atcgagatcgacgggcgcgacgtcacgcatgtcgagccgggcaagcgcggcatcggcatg
gtgtttcaaagctacgcgctctttccgcacatgagcgtgtgggacaacgtcgcgtacggc
ttgcgcatgcgccgcaaatcgcgcgaggacgtgcgcgcagccgtcgacgatgcgctcgcg
atggtgcgcatgagcgaattcgccaagcgctttccgaaggaactgtcgggcgggcagcag
cagcgcatcgcgctcgcgcgctgcttcgcgtaccggccttcggtgatcctgctcgacgag
ccgctcggcgcgctcgacaagaaactgcgcgagcacatgcagtccgagattcgccgcctg
cacaaggagctcggcgcgaccttcgtctacgtgacgcacgaccaggacgaggcgctcacg
ctgtccgatcgcatctgcctcatgaatcaggcgcgcatcgagcaggtcggcacgcccgcg
gacctctacgaccgtcccgccacgcgtttcgcggcgggtttcatcggtcattcgaatctg
ctggaaggcgcgctcgacgagacgcgtggcgcgcgcggcgagccgattctgctcgcggcg
ggcgggcgcattcccttgccgatgaacgcgggcgcgccggcggcttcggccgcgcgtcac
acgctgctgctgcgtcccgaagcgccgcgcctggtcgagccgcaggacggtttcgtcgac
ggcacgatcgcggatgtcgtgttcttcggcagcgatacgcgcgtgcagctttcgatgaac
gacggcagcgagctcacggtgcgctgcgagcgcagcctgagcccgcgcatcggcgaccgg
gtggggctcgtgtgggacccgtatcgcacgacgctgctgcacgcctga
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