Bipolaris zeicola: COCCADRAFT_22624
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Entry
COCCADRAFT_22624 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_22624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_22624
Spliceosome [BR:
bze03041
]
Complex B
Other components
Prp19-related factors
COCCADRAFT_22624
Complex C
COCCADRAFT_22624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
Nup35_RRM_2
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
19145240
NCBI-ProteinID:
XP_007707811
JGI:
22624
UniProt:
W6YJV0
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MPPQIKSDLNRSGWETTDFPSVCEKCLPDNPYVQMLKEDYGAECKICTRPFTIFRWKADR
TARQKRTNICLTCARLKNCCQHCMLDLSFGLPIVVRDAALKMVAPGPQSDINRQYYAQEH
EKEIEEGRGAMEAYEKTDEKARDLLKRLAQSEPYYKKQRRLEAEAGESSGQKALPAPGGS
GSGSGGAGAGAGASRESNHIPGPIRTRDSRGPSARGGMRPGRGGRMGGPAAEPSPQDWLP
PSDPNVASLFVTGVEDDLPEHEIRKHFTQYGQLRSLVCSHRAHCAYVNYAKREDAETAAA
ALKGKVVIKGCPMRVTWGKPKQLDSLDQNVRMQYAKEGRQVAGSSRRAAAASQAAIEAGP
QSNLDSMVIAPPPGADDEVQYASLAGN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccagatcaagagcgacttgaaccgcagcggctgggagacgaccgacttcccg
tccgtctgcgaaaaatgtctgcccgacaacccctacgtgcagatgctcaaggaggactat
ggcgccgagtgcaagatttgcacgcgaccctttaccatattccgctggaaggccgaccgc
accgcccgacagaagcgcaccaacatctgcctgacatgcgcgcgtctcaagaactgctgc
caacactgcatgctcgatctttcgttcggtcttcccatcgtcgtccgtgatgcggcgctg
aagatggttgcacctggcccgcagagcgatatcaaccgacagtactacgcgcaggaacac
gagaaggagatcgaggagggacggggagccatggaagcctacgaaaagaccgacgagaag
gcgcgtgatctcttgaagcgcctcgcacagagtgagccatattacaagaagcaacgacga
ttagaggccgaggcgggcgagagcagcggacaaaaggcgttgccagcgcccggtggtagt
ggtagtggtagtggaggtgctggtgctggtgctggtgcaagccgtgagagcaatcacatc
ccgggacccatcaggaccagagattctcgcggtccttctgcgcgaggaggtatgcggcca
ggacggggaggccgcatgggaggtccagctgcagagccgagtccacaagactggctacca
ccttctgaccccaacgttgcgtcactctttgtcactggtgtcgaggacgacctgccagaa
cacgagatccgcaagcactttacacaatatggacagctccggtcgctggtttgctcgcac
cgagcgcactgtgcatacgtcaactatgccaagagagaggatgcagagactgcggcagca
gctctgaagggcaaggtggttatcaagggttgcccgatgcgagtcacttggggcaagccg
aagcagctagacagcctggatcagaacgtcaggatgcaatacgcaaaggaaggacgtcaa
gtggcgggatcatcgcgacgggccgctgccgcttctcaagccgccattgaggctggtcca
cagagcaaccttgacagcatggtcattgcgccgccaccaggtgccgacgatgaagtccag
tatgccagcctggcaggcaactaa
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