Bipolaris zeicola: COCCADRAFT_25539
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Entry
COCCADRAFT_25539 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K15165
mediator of RNA polymerase II transcription subunit 13, fungi type
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_25539
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
COCCADRAFT_25539
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
Med13_N
MID_MedPIWI
Motif
Other DBs
NCBI-GeneID:
19145819
NCBI-ProteinID:
XP_007711352
JGI:
25539
UniProt:
W6YS60
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MEFLKTCTTNAQAIGDFEAIAYQAISVTRITTNTTTTSTTTSPQSSKQPPPSWSPSEDTR
AIEAELRHALHLVAHDAARPWLWVFKPTTVDKLGQASPQLPEVDGYRLQREHTGAIKAID
LVRPPMRPGAPHPPATSNHPPSTNAPQRGLQSGNNPRPAQQGSTQPQQSADPPPPPDCFT
IYELFTSSVVALISFHVVKDCQVVALNYRTFVSKASKSIADAQTEVDPQPEVHRLTSINV
HWASSGTLLLSTFTDRKNTIRCLSSVSTQIEERQLVGTCIRVAPNGVLATIINFEDPLDS
INEEISIRHRKRTKLTSLEQNIEKWKSSVKRWLGWKGYGLPDLDQRASWVRIRTTLISSP
ILSSPASVGPERDILWPRALCFFHVVNEPDLTITGTNAISAAGSSSILSWFETPESMGFK
DPLDVAQEWFLGKPDRDKILEARKKAKKAEDDAARRKEEHPGLHPSSPLNARGGTYGDLQ
AVSGVYPTPPDGIAPGTGVSYSDTPTVSGAASNVVLVPGGSNPAINLSAPPDSAKTEDQQ
MITTSPAIPPAADNFNTSSGNDDLFEDMEEDGYTGDRINDTDFDFFDGPDNDDVDMLDAP
ALPNDNAPPTHATQDTHPKATTEPQAQDDMSDPFAALENALATASEPTMSQDHAKGKEPA
HMPAPKIEISDNSGDNKSSPVRRNVSFSRAPTPPLSPSKILKALEPSPPRKSASRTRSER
GSESHPDAHFTPVVFNRKMSLSDAKYQGGRFSAHRPTTPTGQVQLSPSPAKNTATTQPKS
LREFPLLSKLRLAAGIASANRIPEIASLARAVSDDSDSSSEASDASGNDSEDEEVEVTPV
AIMNSLTMPAKRKLQSEGNATPLSVTSFAESLGGDWLDLYGLHLDEANLSSFEPSLWDWS
LVNVPSPAERPVAGARYSLPALLPGPAQMPDTPTSQPDPAYEVPDEKPLSAKDSISITQI
VTDQLVSTTLDMLNEDPPTRSEFNNNAAAETPWYKIIKNLFPTVTDCDLPTLAGINEVFQ
DYAALAKAQQRPPARKSDSPAVTGSHMYQIQAPFLRVRRAETHWDLLPPAVAFWETLGLS
PISHPKNIVTFCVYPHSDAIRPCLENFLLNLQLAYDGCKLGNHSRVETAVEYEGGLVPVR
ATSTITPRETFKLLRDTCIQLGKLLALQYGQIREQQDSKVDAFVVYMIDPFGGSSAVWEL
CSAFWALFQAYTQGHPGRPDQPQKPDVVLQIIPMKYVASFDAPVILDPSTYMGLAREVYD
RCPPSAPSGDKTSLSIYKAPAFHLEETLPRNIPFKLISEPAQDLLRENTYMHLGYAISLD
GAWVTAAWTDSCGKSQAVVSYYLGTRMFREIVKEIWQTTIEILQSRRVNWRVCIAKAGVL
EREELETWVFLISCPTQINVFVTLLTAVDTDPPYQFTPTVPNPTPATGAGATTPGSTPQA
GVSPSDPGPGLTPAATPAADPTATDPAADPEARLIDITDDTWGIILAHRLHNSHTTTQFS
PALISGLLVKRGETLQTSNSIAHPIPDPEQGPIVIAVNFLWIGAVGSSRNATTNLPFPSG
TSSSANASASSSISSSDLPSPGGSNLPNPYASNPGTPQSPGPGQEGQRSTTSLMWTPTPQ
TRTTAEGLLKEVLGQFRALGLLAKLRGMRGTRNGTIPWHVAAAKRGVEGLSKISCGAGTA
V
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atggaatttctcaagacgtgcacaaccaatgcgcaagcgataggagactttgaagccatt
gcctaccaagccatctccgtcacccgcatcaccaccaatactactaccacctccactacc
acctcaccacaatcctccaaacaaccacctccatcctggagcccctctgaagacacacgt
gctatcgaggctgaactgcgccatgctctccacctggttgcgcacgacgccgcgcgcccc
tggctctgggtgttcaagccgaccacagttgacaagctaggccaagccagtccccagctg
ccagaagtcgacggctaccgcttgcaacgcgaacacacgggcgctatcaaggccatcgat
ctagtccgtccgcccatgcgcccaggcgctccgcacccacctgctacctcgaatcaccca
ccctcaacaaacgcgcctcaacgaggcttacaaagcggcaacaatccaaggcccgcacag
cagggaagcacgcagccgcaacagtctgctgacccacccccaccacctgattgcttcacc
atctatgagctttttacatcgtctgtcgtcgcattgatctcgttccatgttgtcaaagac
tgccaagtggtggctttgaattatcgcacattcgtatccaaggcttccaagtccattgct
gatgctcaaaccgaggttgacccccaaccagaggtgcatcgtctgaccagtatcaatgtt
cactgggccagctccggcacgcttttgttatcaacctttaccgaccgaaagaacaccata
cgttgtttgagcagcgtctcgacccaaatcgaagagagacagcttgttggcacatgcatc
cgtgtagcacccaatggtgtgcttgctaccattatcaattttgaggatccccttgattcc
atcaacgaggaaattagcatccgtcaccggaaacgtacaaaattgacatctttagagcaa
aacattgaaaaatggaaatcgagcgtaaagcgttggcttggctggaaaggctacggtttg
cctgacttagaccagagagcctcatgggtcaggattcgcaccacgctaatatcaagcccc
attctctcaagcccagcttcagtcggtccagaacgggatatcctatggccacgagcactg
tgtttcttccacgttgtaaacgaaccggatctcaccattacgggaacaaacgccatcagt
gcggctggaagctccagtatactgagttggttcgagacaccagaatccatgggtttcaag
gacccacttgatgttgcgcaagagtggttcctgggaaagccggaccgtgataagattctt
gaagcacgcaaaaaggccaaaaaggccgaagacgacgctgcacgtcgtaaagaggaacac
cctggtctacatccatcatcgccgctcaacgctcgtggcggaacctatggtgatttacaa
gcagtaagcggtgtgtaccccacgccgccagatggaattgctcctggcactggggtatcc
tatagcgacacgccgactgtatctggcgcagcctccaatgttgttttggtccctggagga
agcaatcctgccatcaacctatctgctccaccggacagtgccaagacggaagaccaacaa
atgattactacatctccagccattcctcccgcggctgataatttcaacacatctagcggt
aatgatgacctttttgaggacatggaggaagacggttacacaggtgaccgtatcaacgat
acagatttcgatttctttgacggcccggataatgacgacgttgacatgctagacgcacct
gctctacctaatgataatgcaccacctactcatgctacacaggacacacatcctaaagcc
actactgagccccaggcccaagatgacatgtcggatcctttcgcagcccttgagaacgca
ctggctacagcttctgagcctacaatgagccaagatcatgccaaaggcaaagaacctgcg
catatgccagcacccaagattgaaatctctgacaattcaggagacaacaagtcatcacca
gtgcgcaggaacgtttcattctccagggcacccacgccgcctctcagtcccagcaagatc
ctcaaagcgctggagccgtctccacctcgtaaatcagcatcacgcactcggtccgaacga
ggttccgagagtcatcccgatgcacacttcaccccagttgtgttcaatcgtaagatgagc
ttatctgatgcaaagtatcagggcggacggtttagtgcacatcgccctacgactccgact
ggtcaagttcagctcagtcccagcccagctaaaaatactgccactacacaaccaaagagc
ttgagggaatttcccttactttcgaagcttcggctcgccgccggaattgcgtctgcaaac
cgaatccctgagatagcgtctctggctcgtgcggtcagtgacgattcggattcttcgagt
gaggcgtcggatgcatctggcaacgattctgaagatgaagaggtagaggtgacgcctgtt
gcgatcatgaatagtcttactatgcctgcaaagaggaagttgcaaagtgagggcaacgcg
accccactgtccgtgacctcgtttgcagaatccctagggggtgactggctagatttgtat
ggcttacacctagatgaagccaacctcagtagttttgaaccaagtctttgggactggtct
ctggtcaatgttccttctccggccgagcgacctgtagccggggcacgatacagtctgcct
gctttgctaccaggccctgcgcagatgcctgacacccctacttctcagcccgatcccgcg
tatgaggtacccgatgagaagccgctgagtgcaaaggatagcatctccatcacacaaatc
gtgactgaccagcttgtctctacaacactcgatatgctcaatgaggacccacccaccaga
agcgaattcaacaacaatgctgcggctgagacgccttggtacaaaattatcaaaaacctc
tttccaacggttacggattgcgatctgcctacattggccggtatcaacgaagtattccaa
gactatgccgctctggccaaagcacagcaaaggcctcctgcacgaaaatcagacagccca
gcagtcacaggaagtcacatgtatcaaatccaggcgccattcctgagagtgcgccgtgca
gagacgcactgggatctactgccgcctgcggtggcgttttgggagactctagggctctct
cctatcagccacccaaagaacattgtcacgttctgcgtatatccccacagcgatgcaatc
agaccgtgtttggaaaattttctacttaatctccaacttgcctatgatggttgtaaactt
ggtaatcacagtcgggtggagacggcggtagagtacgaaggcggtcttgtaccagttaga
gcaacctcgaccattacaccgcgagaaacattcaaacttctcagagatacgtgtatccag
cttggtaagcttctcgctcttcagtacggccaaatacgggagcagcaggattccaaggtc
gatgcctttgtcgtttacatgattgatccttttgggggttcatcagcagtctgggagctg
tgttcggccttttgggcgcttttccaggcatacacgcaaggtcatccaggacgtccagat
cagccacagaagccagatgttgtgctacagatcatccctatgaagtacgtcgcttcattt
gatgcacccgttatccttgacccatctacgtacatgggtctcgcgcgagaggtctacgat
cgatgtcctcccagcgcgccaagtggtgacaagacatctctcagcatatacaaagcacct
gcgttccatctggaagagacactaccgcgcaatatccctttcaagcttatatccgagcca
gctcaggacttgctgcgggagaacacgtacatgcatctcggctacgccatcagtctcgat
ggtgcatgggttactgctgcatggactgacagctgtggcaaatctcaagcagtcgtctcg
tactacctggggacaagaatgtttagagagattgtaaaggagatatggcaaaccacaatc
gagatactacaatctcgaagagtcaactggcgtgtctgcattgccaaagctggtgtgctt
gaaagggaggagctcgagacatgggtctttctcatctcatgtcccacacagattaatgtc
tttgtcacattgcttacagcggttgatacggatccgccataccagttcacgcctacggtg
cccaatccaacaccagcaactggcgctggagctaccactccaggttctacaccccaagcc
ggtgtatcgccttcagatccaggaccgggtcttacacccgccgccacacctgccgccgac
cccacggctacagatccagccgccgatcccgaggcacgtctcatagacataactgacgac
acttggggcataattcttgcccatcgtttgcacaactcacatacaacgacacagttcagc
ccagccctcatatccggcctgcttgtcaaacgcggcgaaacattacaaacatccaatagc
atcgcgcatcctatcccagacccagagcaaggacccattgtcatcgccgtaaatttcctc
tggatcggtgctgtaggctcatctcgtaatgccactaccaacttgccttttccctcaggt
acatcgtcttctgcaaatgcatcggcatcctcctcaatatcgtcctcggacctgcccagt
cctggcggttccaatctcccaaatccatatgccagcaaccctggtacgccacagagtcct
ggaccgggtcaggagggccagagaagcacaacaagtcttatgtggacgcctaccccacag
acaagaacgacagccgagggactgctgaaagaagtcctcggacagtttagagcactgggc
ttgttggctaagttgagaggaatgaggggtacgaggaatgggactataccttggcatgtt
gctgctgctaagaggggagttgaagggttgagtaagattagctgtggtgcgggaactgca
gtgtga
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integrated database retrieval system