Bipolaris zeicola: COCCADRAFT_30528
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Entry
COCCADRAFT_30528 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
bze
Bipolaris zeicola
Pathway
bze03082
ATP-dependent chromatin remodeling
bze03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCCADRAFT_30528
03083 Polycomb repressive complex
COCCADRAFT_30528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_30528
Enzymes [BR:
bze01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
COCCADRAFT_30528
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
COCCADRAFT_30528
HDAC complexes
Sin3A-HDAC complex
COCCADRAFT_30528
BRAF-HDAC complex
COCCADRAFT_30528
REST complex
COCCADRAFT_30528
SHIP complex
COCCADRAFT_30528
MiDAC complex
COCCADRAFT_30528
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
COCCADRAFT_30528
Heterochromatin formation proteins
Other heterochromatin formation proteins
COCCADRAFT_30528
Chromatin remodeling factors
NuRD complex
COCCADRAFT_30528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
19146769
NCBI-ProteinID:
XP_007717543
JGI:
30528
UniProt:
W6XRB2
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MVDGNDMAGPTGAVHINNGTASQPKKVAYFYDSDVGNYAYVAGHPMKPHRIRMAHSLIMN
YGLYTKMEIYRAKPASKYEMTQFHTDEYIEFLHKVTPDNMEQFTREQSKYNVGDDCPVFD
GLFEFCGISAGGTMEGAARLNRGKCDVAVNWAGGLHHAKKSEASGFCYVNDIVLGIIELL
RYKQRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGVGSGKNYSV
NFPLRDGITDETYRNIFEPVIEAVMTYYGPEAIVLQCGGDSLSGDRLGCFNLSMDGHANC
VRYVKSFGVPVIVLGGGGYTMRNVARTWAYETGELVSQKMSKQLPFNDYYEYFAPDYELD
VRPSNMENANSHDYLHKIKSAVIENIRRTGRPSVEAFTTIPDVPTALGRAMDSDAEDEED
DMDADENRDVRMTQRQRDKQIEHDGELYDASDDEDYKNNLGVRAQPGVKKRRNITDFPNP
NAAPADALDLMEDINGGSAVSTRQPSAGAKSRTQTPAAAEQEVDKDGDVDMDAPVPESAP
EPVPEAALETAPETAPAAAPPAAIETTDTAAPATAPEREPSPAGVVTPPESPPTAVPATM
APTSAPVADVEMAETDDKEETSAAKEEGEAERDTENVKGEVRAEVAKD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggtggacggaaacgacatggcaggcccaactggcgctgtccacataaataacggcacc
gcttcgcagccaaagaaggtcgcatacttttacgactccgacgtcggtaactacgcctat
gttgcggggcatcccatgaagccgcatcgtatacgaatggcgcatagtctcattatgaat
tacggcctctacacaaagatggagatctaccgcgcaaaacccgcctccaagtacgagatg
acgcagttccacacggacgagtacatcgaattcctgcacaaggtcacgccagacaatatg
gagcaattcacccgcgagcaaagtaaatacaacgtcggagacgattgccctgtatttgac
ggcctctttgaattttgtggtatcagcgctggcggtaccatggagggcgccgctcgcctg
aaccgagggaaatgtgacgtcgctgtaaactgggctggtggtctacatcacgcgaaaaag
agcgaggccagtggattctgctatgtcaatgatattgtcctcggaatcattgagttgctc
aggtataagcagcgtgttctttacatcgacatcgacgtccaccacggagatggtgttgaa
gaggccttttatactaccgatcgtgtcatgaccgtctcattccacaaatatggagagtac
tttccaggtactggcgaacttcgcgacattggcgttggcagtggcaaaaactactccgtc
aacttccccctccgagacggtatcaccgacgagacataccgaaacatctttgagcctgtc
atcgaagcagtaatgacttattatggacctgaagccatcgttctacaatgcggtggtgac
agtctttcgggagataggctcggttgcttcaacctgagcatggacggacatgccaactgt
gtcaggtacgtcaagagctttggtgtaccagtcatcgtcctaggaggtggcggttacacc
atgaggaatgtcgcgcgaacctgggcatacgagactggagagcttgtttcgcagaaaatg
tccaagcagctacctttcaacgactattacgagtactttgcgcccgactacgaactggat
gtccggccatcaaatatggaaaacgccaactctcacgactatttgcataagatcaaatcg
gctgttattgagaatattcgcagaacaggacgaccatccgtcgaggctttcacaacaatt
ccggatgtgcccacggctctgggtcgtgctatggactctgatgctgaagacgaagaagac
gatatggatgcggacgaaaaccgagatgtgcgcatgacgcagcgccagcgtgataagcag
attgagcatgacggtgaactctacgatgcaagcgatgatgaggattacaagaacaacctc
ggagtgcgcgctcagcccggtgtcaagaagagacgaaatattactgacttccccaaccct
aatgcagccccagctgatgccctggatctcatggaagacatcaatggcggaagcgctgtt
tcgactcgacaaccctctgcaggcgcaaagtcgcgtacacagacgcctgctgctgctgag
caggaggttgataaagatggtgatgttgacatggacgcacccgtccctgagtctgcccct
gaacctgttcccgaggccgccctcgagactgcccctgagactgctccggcggctgctcct
ccggccgccattgagaccaccgatactgccgctcctgctactgcacccgagcgggaacca
tctcctgcaggtgttgtaaccccacctgagtcaccacccactgctgtgcctgctacaatg
gcacccacatcagccccagttgctgacgtggaaatggcagaaactgatgacaaggaagag
acttccgcggcaaaagaggagggcgaagcggaacgtgacactgaaaacgttaagggtgaa
gtcagggcggaggtcgctaaggattag
DBGET
integrated database retrieval system