Bipolaris zeicola: COCCADRAFT_31748
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Entry
COCCADRAFT_31748 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
bze
Bipolaris zeicola
Pathway
bze03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
COCCADRAFT_31748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bze03021
]
COCCADRAFT_31748
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_31748
Transcription machinery [BR:
bze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
COCCADRAFT_31748
Coactivators
SAGA/TFTC/STAGA complex
COCCADRAFT_31748
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
COCCADRAFT_31748
STAGA complex
COCCADRAFT_31748
TFTC complex
COCCADRAFT_31748
SAGA complex
COCCADRAFT_31748
SLIK complex
COCCADRAFT_31748
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
LisH
NBCH_WD40
Nup160
PROPPIN
IKI3
DUF2283
Motif
Other DBs
NCBI-GeneID:
19147017
NCBI-ProteinID:
XP_007706361
JGI:
31748
UniProt:
W6YV58
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSGPPQGPGPVRAMSVGNGPPSAGLPPHAAMPPQGGPPPPGSSGPQSQQNLNQIVLEYLS
KKGYVRTEAMLRKESEPQTNGQPLTAQSTEAGGAKYTKAFELLRKYTEDNLDLYRPELRK
LLWPVFVYSFLDLVRDFYTKDAETFFAAYQGLFERDHDEDVKTLRQVRLQSHLQESRIAK
LYLDNKYRITLTTMPFFNLIQFLESKHFDGGSTIIDVIREHLNIVTVDRTATAEKSIAAI
LASGHGDDELPAEDEGIPGHAPGHPLTARHDPEADAARIRLQLGAYPQEAELQDDVRAAL
QEEDAKAAPRPGQPSLLDEFEQRIKREPTEDGPSREFVPLPPSLARDVSMEVQKIIEHRD
RYKMEGRTGGVGPAVSVTMYTFHNTYDSINCIDFSGDNKLVAAGMSESYIRVWSMDGSPL
TSPNDSPDMQPSSSRRLIGHSGPVYAVAFSPSTANPYPSGPPTNSECLLSCSEDKTVRLW
SLDTYTCLVAYRGHDNPIWDLQWGPYGHYFLTGSNDRTARLWSTDHIEPLRIYVGHDNDV
DCVAFHPNNLYVFTGSCDRTVRMWHIAGGNCLRLFTGHTGNVTAISCSPDGKTLASADDA
GNIILWTLETGRRRKRMRGHGKGGIWSLSWSVESSVLVSAGADKTVRVWDVLQETSDKAA
DGVAAKTDGAMTTKGASGTTVTGKKAAKETGVSADQISVFPTKDSPVYKVQFTRMNLVLA
GGAYLPTRS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggcccccccaagggcccgggcctgtaagggctatgagtgtaggaaatgggcct
ccaagtgcaggtctgccaccgcatgcagccatgccgccacagggtggccctccaccgcca
ggctcgtcaggaccgcagtcacagcagaatctcaatcaaatcgtattggaatatctctca
aagaagggctatgtccgcaccgaagcgatgctccgcaaggagtctgaaccacaaaccaac
ggccagcctcttaccgctcagagtaccgaagccggtggcgcaaaatacacaaaggcattc
gagcttctgcgcaaatatacagaggacaacctggatctgtatagacccgagctgcggaag
ctgttatggcccgtttttgtctattccttcttagacttggtgcgcgacttttataccaaa
gacgcagagacattctttgctgcgtaccagggcttgtttgagcgcgaccacgacgaggat
gtcaagacgctccgtcaagtgcggttacagtctcatttgcaggagagcagaatagcaaaa
ctttacctcgacaacaagtaccgaataacgttgacgacaatgccgttcttcaacctcatc
caattcctcgaatctaagcactttgacggcgggtcgacaataatagatgtcattcgtgaa
catcttaatattgtcacagttgacaggacggcgaccgcagagaagagcatagcggcgatt
cttgctagcggacatggcgacgatgaactccctgcagaggacgagggcatcccaggacac
gcccccggtcaccctctcacagcgcgccatgacccagaggcggatgctgcgcgaataaga
ctgcaactgggcgcgtacccccaggaggcggaactacaggacgatgtccgtgctgctctg
caagaggaagatgccaaagctgcgccaaggccaggccaaccaagtttgctggatgagttt
gagcaacgtatcaagcgggagccgacagaggatggaccctcgcgcgagttcgtcccttta
cccccgtcactcgcccgtgatgtctctatggaggtccaaaagattattgagcaccgagat
cgatacaagatggagggaagaaccggcggagtcggacctgctgtcagcgttaccatgtac
accttccataacacatacgacagcattaactgcatagatttttctggggacaacaaactc
gtcgctgccggcatgagcgagtcgtacatccgcgtctggtccatggacggtagtcctctc
acttcaccaaatgatagtccagacatgcagccgtcatcttctaggcgattgatcggccac
tcaggtcctgtctacgcggttgccttctccccctctaccgccaacccgtatccttctggc
cctcctacaaactctgaatgcctcctctcatgctcagaagataagacagtccgcctgtgg
tctttggatacgtacacttgccttgttgcgtaccgtgggcacgataaccccatctgggat
cttcaatggggaccttatggccactacttcctcacaggttcaaacgaccgcaccgcgcgt
ctgtggtcgaccgaccatattgaacctcttcgcatctacgttggtcatgacaacgacgtc
gactgcgtcgctttccaccctaataatctctatgtcttcacaggctcgtgtgaccgcacc
gtccgcatgtggcacatcgccggcggtaactgtctgcgtctttttaccggccacaccggc
aacgtcacagctatatcctgctccccagacggaaagacgctcgcatccgcagacgacgcc
ggcaacatcatcctatggaccctcgaaacaggccgcaggcgcaagcgcatgcgtggccat
ggcaaaggcggtatctggtctctctcctggagtgtggagtcaagcgtccttgtctctgcg
ggcgccgataagacagttcgtgtctgggacgtactacaggaaactagcgacaaggctgcc
gacggtgtcgctgctaagacagatggcgcgatgacgacgaagggcgccagcggcacgaca
gttacagggaagaaggcggctaaggagacgggtgtgtcggcggatcaaatcagcgtgttt
cctacaaaggatagccctgtgtacaaggtccagtttactaggatgaacttggtgcttgcg
ggtggtgcatatctgcctacgcgttcgtaa
DBGET
integrated database retrieval system