Bipolaris zeicola: COCCADRAFT_35805
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Entry
COCCADRAFT_35805 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12857
Prp8 binding protein
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_35805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_35805
Spliceosome [BR:
bze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
COCCADRAFT_35805
Complex C
U5 SnRNP specific factors
COCCADRAFT_35805
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
NHS
Motif
Other DBs
NCBI-GeneID:
19148110
NCBI-ProteinID:
XP_007711129
JGI:
35805
UniProt:
W6Y490
LinkDB
All DBs
Position
Unknown
AA seq
359 aa
AA seq
DB search
MSREKRPANEAFGTSQLVKRTKSDANLGGSSAVAVVNGSSANGALIQAGSRSSALQSPVM
ELTGHSGEVFAARFDPTGQCIASGSMDRSILLWRSSDTCENYGILTGHKQAVLDLHWSRD
SKVLFSASADMHLASWDVETGERIRRHPGHEEVINCMDVSKRGEEVLVSGSDDGYIGIWD
TRTKDAVTFIQTDFPITAICLAEAGNELFTGGIDNDIKVWDLRKQAVTYTLIGHTDTVTS
LQMSPDNQTLLSNAHDSTVRTWDVRPFAPSDRRIRTYDGAPTGQERNLLKASWDFKGEKI
AAGSGDQSVAVWETRTGKLLHKLPGHRGAVNDVRFHPLGEPVLVSASSDRKVMVGELGK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagagaagcgacccgccaatgaggcttttggcacaagtcagttggtcaagcgc
accaagtcggatgccaacctgggaggaagctctgcagtagctgtagtcaacgggtcgagc
gcaaatggcgccctcatacaagcgggatcgcgatccagcgcactgcagtcgccagtcatg
gaattaacgggtcactcaggcgaagtgtttgcagcacggttcgatccgaccggacagtgc
atcgcttctggctccatggaccgttctatattgctttggcgtagctccgacacttgcgaa
aactatggcatcctcactggtcacaagcaggcagtactcgacttgcactggtcacgcgat
tccaaagttctcttctccgcatcggcagacatgcacctagcaagttgggacgtcgaaact
ggagagagaatacgaagacatccaggccatgaggaggttatcaattgtatggatgtgagc
aagcgcggcgaagaggtgctcgtgagcggttccgacgacggctatattgggatttgggac
actagaacaaaagatgccgtaacctttatccagacggactttcccataacagcaatatgc
ctagcagaagctggaaacgagctattcacaggcggcattgacaacgacattaaagtctgg
gatctgcggaaacaggcagtgacatacacattgattgggcacacggatacagtgacttca
ctccaaatgtctccagacaaccaaacactattatccaacgcacacgattcgactgttagg
acatgggatgtaagaccctttgctccctctgaccgacgcatacgaacgtacgatggagcc
cctactggccaagagcgcaacctcttgaaggcaagctgggacttcaagggcgaaaagatt
gcagctggtagcggggatcagagcgtggccgtttgggagacacgaacagggaaactcttg
cacaagctgccaggccaccgaggcgccgtcaatgacgtgcgtttccaccctcttggcgaa
cccgttttggtctccgcctcctccgaccgaaaggtcatggtaggcgagctcggcaagtga
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integrated database retrieval system