KEGG   Bipolaris zeicola: COCCADRAFT_36267
Entry
COCCADRAFT_36267  CDS       T03110                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bze  Bipolaris zeicola
Pathway
bze03030  DNA replication
bze03410  Base excision repair
bze03420  Nucleotide excision repair
bze03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bze00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    COCCADRAFT_36267
   03410 Base excision repair
    COCCADRAFT_36267
   03420 Nucleotide excision repair
    COCCADRAFT_36267
   03430 Mismatch repair
    COCCADRAFT_36267
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bze03032]
    COCCADRAFT_36267
   03400 DNA repair and recombination proteins [BR:bze03400]
    COCCADRAFT_36267
Enzymes [BR:bze01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     COCCADRAFT_36267
    6.5.1.6  DNA ligase (ATP or NAD+)
     COCCADRAFT_36267
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     COCCADRAFT_36267
DNA replication proteins [BR:bze03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    COCCADRAFT_36267
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     COCCADRAFT_36267
DNA repair and recombination proteins [BR:bze03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     COCCADRAFT_36267
   NER (nucleotide excision repair)
    Other NER factors
     COCCADRAFT_36267
   MMR (mismatch excision repair)
    Other MMR factors
     COCCADRAFT_36267
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 19148242
NCBI-ProteinID: XP_007711707
JGI: 36267
UniProt: W6Y929
LinkDB
Position
Unknown
AA seq 883 aa
MAPKQATLGKFFGKPNGDAKQQSKLAFSTKPKSSKKDSTPQEEPQSSPKDLKKEQDEEAD
SDAEVRAPVKEQVESDGEAMEVDSVSSETGKKRQIKEEAEEESEEEPPSKRQRRKPSPKK
TVAQPKAEKASPKSKKSAAKSKAAEPEDEEEEASTKTKSKKGKKEAEKSSALAKEETESS
KEQEEDEAVSSEEEPEEVKVKARKQVQATLASNTKDPYPDWKPGEPVPYAALCTTFSKIE
MTTKRLEILAHCSLFLRQVLRLTPSDMLPTVMLMVNKLAADYAGIELGIGESLIMKAISE
STGRSLQHIKSDQNEIGDLGLVAAKSRSKQPTMFKPKALTVEGVRKGLMAIATIEGQGAQ
GRKVDGIKKLLSAADAHNSGKNVDIEKDKGGPSEAKFIVRTLEGKLRLGLAERTVVVAVA
QAMIFHEMSLQGKTPSTEDLGKAEAMLKTVYSELPSYEVIIPAMIEHGIMNLRENCRLQP
GVPLKPMLAKPTKSITEVLDRFEGKDFTCEYKYDGERAQIHFVAHDAKIELATEAPSAGK
SERGVSNIFSRNSEDLSKKYPDILAKLPTWVKEGTKSFVLDCETVAWDMVEKKVLPFQQL
MTRKRKDVKVEDVKVKVCVFAFDILYLNGEALVTKSFRERREHLKEAFVLVEGEFAFAKY
GNTNELEEIQTLLEDSVKEGCEGLMVKMLDGPESYYEPSKRSQNWLKVKKDYLAGVGDSL
DLVVLGAYYGKGKRTSWYGAFLLACYNPSTEKYETVCNIGTGFSEAILETLHKTLSEIVI
DRPKPFYTHSTGNKDQPDVWFEPRYVWEVKTADLTLSPRYKAAAAEVGGGGKGVSLRFPR
FIKEREDKKPDQASSSRMIAEMYQRQESVAKNKGPSVDDDFEY
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggctcctaagcaagctacacttggaaagttctttggaaaacccaacggcgatgcaaag
cagcaatcgaaactagccttttctacgaaaccgaagtcaagcaagaaggattcaacaccg
caggaagagccacaatcctcgccaaaggacctgaagaaggaacaagatgaggaagccgac
tcagatgcagaggtcagagcgccggtgaaggagcaagtagaatcagatggcgaggcaatg
gaagtcgacagcgtaagctctgagactggcaagaagaggcaaatcaaagaagaagcagag
gaggagtctgaggaggaacctccaagcaaacgtcaacgaagaaaaccttcgccgaagaag
acggtcgcacaaccaaaagctgaaaaggcatcgcccaagtcaaagaaatctgctgctaaa
tccaaggctgcagagccagaagatgaggaagaggaagcatccacaaagaccaagagcaag
aagggcaagaaggaggctgaaaagtcttctgcactagcaaaggaggaaaccgaatcgagc
aaggagcaagaagaggatgaggcagttagctctgaagaggagcctgaagaggtcaaggtc
aaggcacggaagcaagtacaggcaacccttgcgtccaacaccaaggacccatatcccgat
tggaaaccaggcgagccagtcccatatgcggcgttgtgcacaactttttcgaagattgag
atgacgacgaagcgcctggagattcttgcacactgctccttgttcttgagacaggttttg
cggttgactccatctgatatgctgccgactgtcatgctcatggtcaataagcttgcagcc
gactatgcaggtattgagctcggtattggcgagtcactaattatgaaggcgatttctgag
agtaccggtcgaagtttacaacatatcaagagcgaccaaaacgagattggagatctgggc
cttgttgcagccaagagtcgatcaaaacaacccaccatgttcaaacccaaagcattgaca
gtcgaaggtgtgcgcaagggactgatggccatcgctactatcgaaggacaaggtgctcag
gggcgcaaggttgatggaatcaagaaactgctatcagcggcagatgcgcacaactctggc
aagaacgttgatattgagaaggacaaaggtggacccagtgaagccaagttcatcgtccga
accctcgagggtaagcttcgattaggccttgctgagaggaccgttgtcgtagccgtcgca
caggcaatgatattccatgagatgtcacttcaaggcaaaacaccgtcgacggaggacttg
ggcaaagccgaagctatgctaaagacagtgtacagcgagctgccaagttacgaagtcatc
atcccagcaatgattgagcacggcatcatgaacctgcgcgagaactgtcgcctacagccc
ggtgtacctctgaagcctatgcttgccaagccaacaaagtccatcacggaggtgctagat
cgctttgagggcaaggactttacctgtgaatataagtatgacggagagcgtgcacagatt
cactttgtcgctcacgatgcaaagattgagctggctactgaagcacccagtgctggcaag
agcgagcgcggcgtgtccaacattttctcgcgcaactctgaggatttgtccaagaaatat
cctgacattctcgccaagctgccgacttgggttaaagaaggtacaaagagcttcgttctc
gactgcgagacggttgcctgggatatggtagagaagaaggtgcttccttttcaacagctc
atgacgaggaagaggaaggatgtcaaggtcgaagacgtcaaggtcaaggtttgcgttttt
gcctttgatatcctctatctcaatggcgaggcgttggtaacaaagtcattccgtgagcgt
cgcgagcatctcaaagaagccttcgtgcttgtcgaaggcgagtttgcatttgccaagtat
ggcaacaccaacgaactagaggagatccaaacactccttgaagactcagtaaaggaaggc
tgcgaaggtctcatggtcaagatgttggacggcccagagtcttactacgagccatccaag
cgctcgcagaattggctcaaggtcaagaaggactaccttgccggcgtgggtgattcactg
gatcttgtagtgctgggagcctactacggcaagggcaagcgtaccagttggtatggtgcc
tttttgcttgcctgctacaatccttcgacggaaaagtacgaaacagtctgcaacattggt
actggtttctctgaagccatcctggaaactctgcacaagacgctttctgagattgtcatc
gatcgcccgaagccattctacacacattcgactggtaacaaagaccagcctgacgtgtgg
ttcgagccgcgatatgtgtgggaggtcaagactgcagacctcaccttgtcgccgcggtac
aaggcagctgcggctgaagttggcggcggtggcaagggtgtcagcttacgctttccgcgt
ttcatcaaggagagggaggacaagaagccggatcaggcgagttcaagtcgtatgattgcg
gaaatgtaccaaaggcaggaaagcgtggccaagaacaaggggcctagtgttgatgatgac
ttcgagtattga

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