Bipolaris zeicola: COCCADRAFT_46593
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Entry
COCCADRAFT_46593 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
bze
Bipolaris zeicola
Pathway
bze03013
Nucleocytoplasmic transport
bze03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
COCCADRAFT_46593
03015 mRNA surveillance pathway
COCCADRAFT_46593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_46593
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_46593
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
COCCADRAFT_46593
Spliceosome [BR:
bze03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
COCCADRAFT_46593
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
19149865
NCBI-ProteinID:
XP_007710795
JGI:
46593
UniProt:
W6YTW6
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAALRRAQDIDERRTEASPDRGRERPKDRHRDRSYDPRTSSPAPRAGRHHSRHRAHDHDA
RSSGKHSRGHSRDKSLDRDRTRRRSRSASKEDRYRGSEREASADRVAHPHRRHHHHHHHH
HHHHHHRHDTTPSSKHYHSRSPSPRPSSKRVKRPRSRSTVRSRSPTRRADSSGRPSARAY
SPRPHTSDRDRLPRRNTPNSYLPPASHRRQSPSVDTYYRPATQRARKRSVSPDRRSRREL
SPRALSPRWTHGRTTPPLDHSRERSYKPSPVRGRTRSRGRAPRRVRSRSSLRRRSPTPVH
KSSPPSSKRARTPPRRSRSPPIPIRRRQSRSPSRGSKSRYPTKHVSRRSSPVSGSGYNSD
TSRGRRDENKMRGAYHYQGRGGFQQSPPYLSHKQYSPQNQSPYHSGRGGWSNQSYPNHGS
PPHGYNSGQSPYHQSQSPGYYQNQSYPQSGFQSSSHRGGHGGFRGNSFHGSDRRISGPAG
GAPFSGPGGRGRGAAPTQFSNLSWTPASGTRGGRPASEAPRPQPLPTSQTVADSTSVDAD
DNPFRPSKDLR
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctgcgacgggctcaggatatagacgagcggagaactgaggcatcgcctgac
cgaggtagggaacgtcccaaagaccgccaccgcgaccgcagctacgaccctcggacatcg
tcaccagcaccacgggcgggcagacatcattccaggcatcgcgctcacgaccacgacgcc
cgctcatcaggcaaacacagccgaggccattcgcgcgacaaaagcctcgacagggaccgc
acgcgtcggcgaagtcggagcgcctccaaggaggaccgctatcgaggctcagagagggaa
gccagtgcagacagggttgcccacccccatcgtcgacaccaccaccaccatcatcatcac
catcaccatcaccaccaccgccacgacacgacgccatcctccaaacactatcacagtcgc
tccccatcccctaggccatcatccaaacgcgtaaaacgcccgcggagtcgcagcacagtg
cgctccaggtcgcctacacgacgtgcagattcctcgggccggccgtcggcaagggcatac
tcgcctcgccctcatacctctgaccgcgatcggctgcctcgacggaacacccccaacagt
tacttgccgcccgcttcacacaggcgtcagtcgccatccgtagacacctactacagacca
gcaacacaacgtgcacggaagagatcggtttcacccgatagaaggtccaggcgtgaattg
tcgccgagggcattgtccccgaggtggactcacgggaggaccacgccgcccttggatcat
tctcgtgaaaggtcctacaaacccagtcctgttcgtggtcgaacaagaagtcgcggtcga
gcaccaagacgcgtcaggtctcgctcgtcgctccgcagacggtctccaacacctgttcac
aaaagttcgccccccagctctaaacgagctaggactccaccacgcagaagtcgatcacct
cctatacccatacgacgtcgtcaatcccgttcaccctctcgagggtcaaagtcaagatac
cctactaagcacgtttcccgcagaagctcaccggtatctggatctggctacaattcggat
acgtccaggggtcgtagagacgagaacaagatgagaggagcctaccattaccaaggccgt
ggtggatttcagcaatccccaccctatctttcccacaaacaatactctcctcaaaatcag
tcaccctaccacagcggcagagggggttggagcaaccagtcctatccaaaccacggatct
cctccacatggctacaattcagggcaatccccatatcatcaaagtcagtctcctggctac
taccaaaaccagtcataccctcaatccggttttcaatccagttcacatcggggtggacat
ggtggcttccgcggaaacagctttcacggttccgatcggcggatctcaggccctgccgga
ggtgctccctttagtgggcctggtggccggggtcgaggcgctgcgcctacccaattctca
aatctctcatggacacccgcgtctggaacacgaggcggtcgtcccgccagcgaagcgcca
cgcccacagcctcttcccacatcacagacggtagctgattccacatctgtcgacgctgat
gacaatcctttccgcccttcgaaagatctacgg
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