Bipolaris zeicola: COCCADRAFT_5110
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Entry
COCCADRAFT_5110 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K10752
histone-binding protein RBBP4
Organism
bze
Bipolaris zeicola
Pathway
bze03082
ATP-dependent chromatin remodeling
bze03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
COCCADRAFT_5110
03083 Polycomb repressive complex
COCCADRAFT_5110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bze03036
]
COCCADRAFT_5110
Chromosome and associated proteins [BR:
bze03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
COCCADRAFT_5110
Histone modification proteins
HAT complexes
HATB complex
COCCADRAFT_5110
HDAC complexes
Sin3A-HDAC complex
COCCADRAFT_5110
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
COCCADRAFT_5110
PRC2.2
COCCADRAFT_5110
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
COCCADRAFT_5110
Heterochromatin formation proteins
Other heterochromatin formation proteins
COCCADRAFT_5110
Chromatin remodeling factors
NuRD complex
COCCADRAFT_5110
NuRF complex
COCCADRAFT_5110
NuRF complex (fruit fly)
COCCADRAFT_5110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
NBCH_WD40
MIOS_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
19150006
NCBI-ProteinID:
XP_007712318
JGI:
5110
UniProt:
W6Y7D4
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MDETMSDAHDSHEMDDQEQVEQKIINEEYKIWKKNSVFLYDMLYGRALEWPTLTTQWLPD
KKPVEGTNMSQHRVILGTHTSNQAQNYLQIAHCEIPDFREPDLSELNEERGEIGGHGNAK
RPFDFKIVQKINHPGEVNKARYQPQNPDIIASLCVDGKVLVFDRTKHPLQPKDDSIKFEA
ELIGHSKEGFGLSWSPLKEGHLVTGNEDTTVKTWDLKSGFSKSNKTLSPTATYTVHTATV
NDVQYHPIHNFLIGTASDDLTWQIIDTRMEIHKKALYRKEAHEDAVNCISFHPEFESTFA
TGSADKTVGIWDLRNFDKKLHSLQSHRSDVIGLQWHPQDAAILASSSYDRRICLWDLSKI
GSEQTEEEAEDGPPELLFMHGGFTNRICDFDWNKNDPWLMMGAAEDNQLQIFRPSRKLVE
PLKKSVNHGEVSD
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacaatgagtgacgcccacgattcgcatgagatggacgaccaggagcaggtc
gagcagaagatcatcaacgaagagtacaagatatggaagaagaactccgtatttctctat
gacatgctgtatggccgcgcgctcgagtggccaacactcaccacccaatggcttcccgac
aaaaagccggtcgaaggcacaaacatgagccagcaccgcgttatcctcggtacccacacc
tcgaaccaagcgcaaaactacctccagatcgcccactgcgagatacccgactttcgcgag
cccgacctgtcagagctcaatgaagagcggggagagattggcggacacggcaatgccaag
cggccctttgacttcaagattgtacaaaagatcaaccacccaggcgaggtcaacaaggca
cgataccagcctcagaacccagacataatagcatctctatgcgtagacggcaaagtcctg
gtgttcgacagaaccaagcatcccctacaacccaaggacgattcaatcaagttcgaagcc
gagctcatcggccacagcaaggagggtttcggtctaagctggagtccgctcaaagaaggc
cacctggtaaccggaaatgaagataccacagtcaagacctgggacctcaaatccggcttc
tcaaagagcaacaagacactcagccccaccgccacctacaccgtccacaccgcaaccgta
aacgacgtccaataccaccccatccacaacttcctcatcggcaccgcctcggacgatctc
acctggcaaattatcgatacccgcatggaaatccacaagaaagccctctacagaaaagaa
gcccacgaagacgccgtaaactgcatttccttccacccagagttcgaaagcacgttcgct
acgggctcggcggataaaacagttggtatctgggacttgcgaaactttgataagaaactg
catagcctccagagccaccgttccgacgtcatcggtctgcagtggcacccacaagacgct
gctatcctcgcaagttccagctacgatcgccgtatttgcctctgggacctcagcaagatt
gggtctgaacagacggaggaagaggcggaagatggaccgcctgagttgttgttcatgcac
ggcggtttcacaaacagaatctgcgactttgactggaataagaatgacccgtggcttatg
atgggtgcggcggaggataaccagttgcagattttccggccctcaaggaagcttgtggag
ccgctgaagaagagtgtgaatcatggggaggtgtcggattga
DBGET
integrated database retrieval system