Bipolaris zeicola: COCCADRAFT_85483
Help
Entry
COCCADRAFT_85483 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bze
Bipolaris zeicola
Pathway
bze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCCADRAFT_85483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bze03041
]
COCCADRAFT_85483
Spliceosome [BR:
bze03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCCADRAFT_85483
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
PRP4
ANAPC4_WD40
NBCH_WD40
WDR54
WD40_like
Nbas_N
PROPPIN
Motif
Other DBs
NCBI-GeneID:
19151964
NCBI-ProteinID:
XP_007708309
JGI:
85483
UniProt:
W6YD30
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MSMHPARQAYVEEENGVGDAMEGIDLASVPLDRNHAMPGGGNASASSLMEDFDRKRRAAQ
LVVPTADRDVKAKLRSRGEPITLFGEGPAERRDRLRALLAEAQEALGEDAADVDMQDAEE
GAGDEQEEFYTQGTQALLDARREMAKYSLPRAKERIAYQRREATIPLKTHIEFRNGIKER
LKGFELYGSQTADRPVSIVRVSPNGQYVAYGTWGGKVALLEIPSLEQKKAYRGGHAERAT
GIDWMPDATLPGSTVSSSSVNFASGGAGGKVQLWSLDDDKPLRTLEGHTDRVCRLAFHPT
GRYLASASDDTTWRLWDVNTGQELLMQEGHSKEVYTVSFNGDGSLVASAGLDSIGRVWDV
RTGRVIYMLESHIKPIYGLDWAIDGHRLLSGSGDGFMKCWDVRAMRETNSIAANTGGVTD
LRWFKGTDGPTSGIPLQEDEQGQVIPKKASTFVISSGFDKNVQIFSADDWAHCKTLQGHS
GPVFSTDVTRDACWIVSGGKDRTVKLWSRDDNGGI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgcatccggcgcgtcaggcctatgtcgaggaggagaatggtgtgggcgatgcc
atggaggggatagaccttgccagtgtcccgctcgaccgcaaccatgccatgcccggtgga
ggaaacgcgtcggcttcttcgctcatggaggattttgatcgcaagcgacgagccgcccag
ttagttgtgcccacagccgaccgcgatgtcaaagcaaagctgcgttcgcgcggagagcca
ataaccctgttcggcgagggacctgctgagcgccgtgatcgacttcgcgctttgcttgca
gaggcacaggaagcattgggcgaggatgcagcagacgtagacatgcaagatgcagaagag
ggggctggggacgagcaagaggaattctacacgcagggcacacaggcacttctggatgcg
cgacgggaaatggccaagtattcactgccacgagccaaagaacgaatcgcatatcagcgt
cgcgaggctactataccgctcaagacgcatattgagttccggaatggcatcaaggagcga
ctgaagggctttgaactctacggatcgcaaacagcagatcgaccagtgagcattgtacgc
gtttcgccaaatgggcagtacgtcgcatacggcacctggggcggcaaggtggcactgctt
gagatccccagtcttgagcagaagaaagcataccggggtggacatgcggaacgggcgaca
ggaatagactggatgccggacgcaaccctgcctggtagcactgtatcgagttcaagcgta
aactttgcctctggaggagcaggtggaaaggttcagctatggtcgcttgatgacgacaaa
cctctgcgtacgctcgaaggacacactgaccgtgtttgtcggttagcgtttcatcctaca
gggcgatacctagcgtcagcttctgatgataccacatggcggctctgggacgtgaacacg
ggtcaagagctccttatgcaagaggggcattcaaaggaggtctatactgtcagtttcaac
ggcgatggttcattggttgcaagtgccggtctggacagcattggtcgtgtgtgggatgtt
cggacaggtcgagtcatctacatgctggaaagtcatatcaagcccatctacggattggac
tgggccatagatggccaccggctactttctggatcaggagatggatttatgaaatgctgg
gacgttcgtgcgatgagagagaccaactcgattgcagccaacacaggaggagtcactgat
ctacgatggttcaaggggactgatggtccgacgagcggcataccgctgcaagaagatgag
caagggcaagtgattccgaagaaggcgtcgacttttgtcatttcgtctggatttgataag
aatgttcaaatcttctcagcggacgattgggcgcactgcaagactctgcaaggacactct
gggcccgtgtttagtacagatgtcacaagggacgcatgctggatcgtgagtggaggcaaa
gatcgcaccgtgaagctgtggtctcgggatgataatgggggaatctga
DBGET
integrated database retrieval system
