Bipolaris zeicola: COCCADRAFT_89375
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Entry
COCCADRAFT_89375 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14015
nuclear protein localization protein 4
Organism
bze
Bipolaris zeicola
Pathway
bze04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCCADRAFT_89375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_89375
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
COCCADRAFT_89375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
zf-NPL4
AAA
Rep_fac_C
DNA_pol3_delta2
Rad17
AAA_22
RuvB_N
AAA_11
AAA_16
AAA_assoc_2
AAA_19
DUF815
AAA_28
SLFN-g3_helicase
AAA_7
Mg_chelatase
AAA_24
AAA_5
bpMoxR
AAA_18
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
19152761
NCBI-ProteinID:
XP_007709742
JGI:
89375
UniProt:
W6YED2
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MILRFVSKEGQFRLTVQPEDTFPDILPQIAEKLPKNVDLESLSVSNRPQGGDARKFVDLK
GVSFKQVNLSNGAQLFLAFEEQSTPSNGHAAIASGGARLNGKPVQPSETASVPLDGPTQI
IKKPWEVVRQSPLDDRLDRQDGKIPRKRDARMCTHGPKGMCDYCMPLEPYSPEYLAEKKI
KHLSFHSYLRKVNSAKNRPELGSSYIPPLTEPYYRVRPDCPSGHKPFPEGICTKCMPSAI
SLKPQEYRMVDHVEFASIQVVDDLINFWRQTGCQRLGFLYGRYEEYTEVPLGTKAVVETI
YEPPQINEVDGISLGDWDNEQVIDDIAAQCGLQRVGVIFTDLLDADKGDGSVICKRHIDS
YYLSSLEVCFSARYQAKYPRPSKWSDTGRHGSNFVTCVISGDDQGQIGISSYQVSNDAVE
MVRADIIEPSAEPKVMLVQSEEDNEALNRTRYIPEVFYRKINEHGANVQEIAKPDFPVEY
LLLTLTHGFPTQPNPLFTGGKFPIENREAMGEMPEITHLSKALNAKANGLALNTASGLKA
ISNFHMLCFIHNLGILSKDEESLLFKVASTHDTSEGSALQHTPGWATLLTILKESGERPP
KRSYQSPSPSQPARRGAAAPLPLEHQRTMRQPSYGSDSDSVQLAKRVKGPPQVTMADFFN
IKARQQAAAQASSSKAPTTKQEPNRLQPWVEKYRPKTLSEVTAQDNTIQVLSRTMQSSNL
PHMLFYGPPGTGKTSTILALAKELYGPELMKSRVLELNASDERGISIVRQKVKDFARQQL
SVAPTYNVMVEDKSGTGEGGMVRYRDKYPCPPFKIIVLDEADSMTQDAQSALRRTMETYS
RMTRFCLVCNYVTRIIDPLASRCSKFRFKSLDQGNAVKRVSDIAALESVRLDDGVAEELV
RVADGDLRKAITFLQSAARLVGAIQSQGGGSKKGKKRTAVPEDDEMDIDSGSTATPSVSL
PTIAEIAGVLPPETLSTFTSALFPKSSAQKTIRYNEIAKVVENMVAEGWSAAQTVGQLYE
QIMFDERVEDVKKVRLAVVFSETDKRLVDGSDEHLAVLDLGVRVAGVLCL
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgatactcaggttcgttagcaaagagggccaattcagattgacggtacagcccgaggat
actttcccagacattctcccacaaatcgccgagaagctccccaagaatgtcgatctcgaa
agcctcagtgtcagcaaccgcccgcagggtggcgatgcgaggaaattcgtagatctcaaa
ggtgtgagcttcaagcaagtgaacctgtcgaacggtgcacaactcttcctcgcttttgaa
gagcaatctacaccatcgaatggccatgctgcaattgcctctggcggcgcgcgactaaat
ggcaagcccgtccaaccctccgaaactgcctctgtgcccctcgatggccccacgcaaatt
ataaagaagccatgggaagtggtcagacagtctccacttgacgatcggctcgacaggcaa
gatggcaagattccccgcaaacgcgacgcccgcatgtgtacccacgggcctaagggcatg
tgcgactactgcatgccgttggagccctactcgcccgagtaccttgccgaaaagaagatc
aagcatctttctttccactcgtacctccgcaaggtcaactcggcaaagaaccgaccagag
ctcggaagttcttacatcccgcctctgactgaaccctactaccgcgtacgacccgactgt
ccatcgggacacaagccattcccagagggtatctgtacaaagtgcatgcccagcgccatc
tcgctcaaaccacaagaatatcgcatggtggaccacgtcgagtttgcatctatacaggtt
gtcgacgatttgatcaacttctggaggcaaactggttgtcaacgactgggtttcttatat
ggcagatatgaggagtacactgaggtgccactagggacaaaggctgtggttgagaccatc
tacgagcctccgcagatcaatgaagtagacgggatatcgttgggtgactgggataacgag
caggttattgacgacatcgccgcacagtgcgggctgcaacgagtcggtgtcatctttact
gatcttctcgacgccgacaagggcgatggctccgtcatctgcaagcgacacatagactcc
tactatctgtcttcacttgaggtttgcttctcggcacggtatcaggcaaagtatcctcgg
ccgtcaaaatggagcgataccggtcgacatggatctaactttgtaacatgtgttattagc
ggtgacgaccaaggtcagattggcatctcatcttatcaggtatcaaacgatgctgttgag
atggtgcgcgccgacatcatcgagccttcggcggaacccaaggttatgcttgttcagtct
gaagaagacaacgaggcgctcaaccgcacgcgatatatccctgaagtcttctaccgaaag
atcaatgaacatggcgcaaatgtacaagaaattgctaaacctgactttccagttgagtat
ctgcttcttacacttactcatggtttccccactcagccaaaccctctttttaccggtggc
aagtttccaattgaaaaccgcgaagccatgggcgaaatgcccgagatcacgcatcttagc
aaggctctcaatgccaaggcaaatggccttgctctcaacactgccagtggcctgaaggcg
atttcgaactttcacatgctctgcttcatccacaacctgggcatcctatcaaaggacgaa
gaatcgcttctgttcaaggttgcatcgacgcacgatacctcagaaggctcagcactccag
cacacgccaggctgggcaactcttctaaccattctcaaagaaagtggtgagcgccccccg
aaacgttcttatcagtctccctctccctctcaaccggccaggaggggggctgcagcacct
cttcccctggagcaccagcgtacaatgcgacagccctcctatggctcagattccgattca
gtacaattggctaagcgggtcaaggggccaccacaagtcacaatggctgacttcttcaac
attaaggcccggcaacaggccgctgcgcaggcgagttcttcaaaagcccctacaacaaag
caagagccaaatcgcttgcaaccatgggtagagaaataccgacccaagacgctgtccgaa
gtcacagcccaggacaacactatccaagtcctctcccgcacaatgcagtcctccaaccta
ccccacatgctattctacggccccccaggaacaggaaaaacctcgactatcctcgccctt
gccaaagaactctacgggcccgaactcatgaagtcgcgtgtgctggaactaaacgcatct
gacgagcgcggtatcagcattgtacgacaaaaagtcaaagactttgcccgccaacaactt
agcgtagcaccaacatacaacgtcatggtagaagacaagagcgggacaggagaaggaggc
atggtacgataccgagacaagtacccatgcccacccttcaaaatcatcgtcctcgacgag
gcagacagcatgacgcaagatgcgcaatccgcgctccgccgcacaatggaaacatacagc
cgcatgacgcgcttctgccttgtctgcaactacgtcacccgcatcatcgaccccctcgcc
tcccgctgctccaaattccgcttcaagagtctcgaccagggcaatgccgtcaagcgcgtc
agcgacattgctgcgctcgagagcgtgcggctggacgacggtgtagcagaggaattggtg
cgtgtagcggacggtgatttacgaaaggcaatcacattcttgcagtctgctgcgcggctt
gtcggcgctatacaatctcaaggcggcggcagcaaaaagggaaagaaacgtacggcggtc
ccggaagatgacgagatggacatcgattctggcagcacagcgacaccgtctgtatcactc
cctaccatcgccgaaatcgcaggcgtcttaccccctgagaccctctctactttcacatct
gccctcttccccaagtcttcagcacaaaaaacgatacggtataatgagattgccaaggtc
gtcgagaacatggtggcggaggggtggagcgcagcgcagacggtggggcagttgtacgag
cagattatgtttgatgagagggtggaggatgtgaagaaggtgcggcttgcggtagtgttt
agtgagacggataaaagacttgtggatggaagtgatgagcatctggctgtgctggattta
ggcgtcagggtcgcgggggtgttatgtttgtga
DBGET
integrated database retrieval system
