Bipolaris zeicola: COCCADRAFT_97376
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Entry
COCCADRAFT_97376 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bze03009
]
COCCADRAFT_97376
Enzymes [BR:
bze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
COCCADRAFT_97376
Ribosome biogenesis [BR:
bze03009
]
Eukaryotic type
Pre-60S particles
Helicases
COCCADRAFT_97376
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
Motif
Other DBs
NCBI-GeneID:
19154363
NCBI-ProteinID:
XP_007712776
JGI:
97376
UniProt:
W6YBP6
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MARRASSPALSETEFDIFDALAGGDDIPQETDLNADLGLDLDVGSDDGSDDEAFIAAKQA
ASNRKASNVGKSVKKGGGFQAMGLNAALLKAITQKGFKVPTPIQRKAVPLMLQGEDVVGM
ARTGSGKTAAFVIPMIQKLKAHSAKVGARGIIMSPSRELALQTLKVVKELGRGTDLRTIL
LVGGDSLEEQFSSMTTNPDIIIATPGRFLHLKVEMGLDLSSVKYIVFDEADRLFEMGFAA
QLSEILYALPASRQTLLFSATLPKSLVEFARAGLQEPKLIRLDAESKISPDLKSAYFTIK
SGDRDGALLYLLDNVIKVPVGETDAAKKAREESEKPSKKRKRSEGFVKDLPVAESTIIFA
ATKHRVEYLANLLRNLGYAISYVYGNLDQTARKEQIQDFRTGLTRILIVTDVAARGVDMP
HINHVINYDFPSQPKIFVHRVGRTARAGRKGWAYSLCRNVDLPYLIDLQLFLGKRLLMGR
SSDEPNYADDFVVGSLSPWQVESSVEQVNRQLSEDEDLALLLSVAEKGERQYQRTRNQAS
AQSVVRAKELAASPNFAETHMLFSNDAHTAQREKEDMLARIQSFRPAETVFEIGKRGIHS
ETAEIMRKRREQVERQKAKQAANKKGEDELDTIHASSREANDEDMSSEDEVEVAEGVYDS
DSDELEVSVSQPASKKSKQDSWRNDDYFMSYTPKENLAEEKAYGVSGGDAGNTNFVSAAR
AAEMSLVNDEIQGFADAVKSKMRWDKKSKKYVNRTNDDDGSKGAKMIRGESGQKIAASFR
SGRFDDWRKANKVKMPRVGEMESANRPAASFNNAPRYKHKSEKAPKQADRYRDDYHVQKK
RVAEAQEKRIGAFKDGKGKSELRDVDTVRKNRKIQEKRREKNARPSKKRKH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcgcgagctcgccggcgctctccgaaaccgagttcgacatttttgatgct
ctagccggcggcgatgacattccgcaagagacggacctgaacgcagatctgggcttggat
cttgacgttggcagtgacgatggatccgacgatgaggccttcatcgctgcgaaacaggcc
gcttcaaatcgcaaagcctcgaacgtaggcaagtcggtcaagaagggtggaggcttccaa
gccatgggcctaaatgcggcgcttctgaaagctatcacacaaaagggcttcaaggtcccg
actccgattcagcgcaaggcagtgccacttatgcttcaaggcgaggatgtggtgggaatg
gccagaaccggttccggaaagacggccgctttcgttatacctatgatccagaagctcaag
gcgcactccgcaaaagtgggcgcgcgtggaattatcatgtcgccctctcgcgaacttgca
ttgcaaacactcaaggtagtcaaggagctgggtcgtggtaccgatttgcgaaccatcttg
ctcgttggtggtgacagtcttgaagaacaatttagctcaatgaccacaaaccccgatatc
atcattgccactccgggacgtttcctgcatctcaaggttgagatgggccttgacctctcc
tcggtcaagtacattgttttcgacgaagccgatcggttgttcgaaatgggttttgctgcc
caactttcggaaattctttacgccctccccgcctcgaggcagacactcttgttcagtgcc
acactgccaaagtcactcgtggagtttgcccgagcgggcttacaagagcccaagttgata
cgtctggatgcggaaagcaagatctcgccagatctcaagagtgcttactttaccatcaag
tcgggcgatcgagatggagctctgctgtaccttctggacaatgtcatcaaagttcccgta
ggtgagactgatgccgcaaagaaggcccgagaagagagcgagaagcccagcaagaagcgg
aagcgtagtgaaggcttcgtcaaggaccttcctgttgcagagtctaccattatctttgct
gcaacgaaacacagggtagagtatctggccaaccttcttcgaaatctgggatatgccata
tcttatgtgtacggtaatctcgatcaaactgctcgaaaagagcaaattcaagacttccga
actgggttgacccgtatccttatcgtcacagacgttgctgctcgtggtgttgacatgcct
cacatcaaccatgtcataaattatgactttccgtcacaacccaagatttttgtccatcgg
gtcggacgaacagcacgtgcgggaagaaaaggttgggcatacagtctatgcagaaacgtc
gacctaccctacctcatagatctgcagctctttctaggcaagcgcctgcttatggggcgg
tcgagtgacgagccaaactacgcagatgattttgttgttgggagcttgtcgccgtggcag
gtagagagctctgtggagcaagtcaacagacaactcagcgaggacgaagacttggcgctt
ctgctaagtgttgctgaaaagggtgagcgacagtaccaacgcacacgtaaccaggcaagc
gcacagagtgtagtgcgcgccaaagagttagcagcgtctcctaattttgctgaaacgcac
atgctttttagcaatgatgcacacaccgctcaaagagagaaagaagacatgctcgcgagg
atccagtcattccgtcccgcggaaacagtgtttgaaattgggaaacgcgggatccatagc
gaaacagctgagattatgcgcaaaagaagagagcaggttgagcgtcagaaagctaaacag
gcggctaacaaaaagggtgaagatgagctggacactattcatgcttcttcaagagaagca
aatgacgaggacatgtcctcggaagatgaagtcgaggttgcagagggtgtctatgattct
gactctgacgagcttgaagtgtcagtgtcacagccggcctcgaagaagtctaagcaagac
agctggaggaacgacgactacttcatgtcgtatactcccaaggagaacttggccgaagaa
aaggcatatggagttagcggtggagatgctggcaacaccaactttgtgtctgcagcaaga
gcggcagagatgtcactggtcaacgacgagattcaaggtttcgcagacgcggtcaagtcc
aagatgcggtgggacaaaaagtccaagaagtatgtcaaccgcaccaacgacgacgacggg
tccaagggagccaagatgatccgcggggagagtggacaaaaaattgcggcgagtttccgc
agcggtcgttttgatgactggcgcaaagcaaacaaggtcaagatgccgagggtgggcgag
atggaatccgccaaccgcccagcagcatctttcaacaacgcacctcggtacaagcacaaa
tcggaaaaggcaccgaagcaagctgaccgataccgcgatgattatcatgtgcagaagaag
cgggtggctgaagcacaggagaagcgcattggtgccttcaaggacggaaagggcaagagt
gagcttcgggatgtggatacagtgcgcaagaaccgcaaaatccaggagaaacggcgagaa
aagaatgcgcggccgtcgaaaaagcggaaacattga
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