Bipolaris zeicola: COCCADRAFT_98402
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Entry
COCCADRAFT_98402 CDS
T03110
Name
(RefSeq) hypothetical protein
KO
K18715
nucleoporin NUP159
Organism
bze
Bipolaris zeicola
Brite
KEGG Orthology (KO) [BR:
bze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bze03019
]
COCCADRAFT_98402
Messenger RNA biogenesis [BR:
bze03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
COCCADRAFT_98402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
19154567
NCBI-ProteinID:
XP_007713149
JGI:
98402
UniProt:
W6Y3M5
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MSKSHAPAVEVGAEVPEIETEHLGFKVLSNGKQGPKKVKLLPRPWPAENLPSASANLLSV
ASKPGLLAAAGPNVLVIASTDAVRKAFEGKTIADDIDKPDDPRLEERDIDVVSDFTPDVT
ISTENLRHVAFSADGDFLVVAPEQQASISIFSVAEVIKGRKDAEQTVQTDAPVRALLPNP
APEFEHFFAIVLDSGKLQICNVTDGAKKTIRDTDVNCAAWSTRGKAVVSGSTDGTCAINM
TNGELKGVIPRAPDVDESYEVTGVTWLNTEEFLAVYSIRDQDPENPEPKKFSVIKSAKGW
GSFTYHAFAWDPLPEAFEPPRRPLPARFSSTRLRNWKPDLEDMLIITSSHADSIAILAST
SNKISPNQQNLKELMLVNVDDTKKASVPRTAYGEDELDSVFIGEALDLSSKEKILRPIPS
LEEINEAPWPLPAYMALTHEGLLTAWWVVWNRSIEAGERYPGLIFKSESTQREPTTTPRA
HTPASKLPVATSTTPFGQPSTPSHTPFGKSANTPGTPGIPHFGNAGHNSPSPALMRPTPP
GFGTPGFGASTSSIPTPTLSKPPQPAFGAPTAVGGAGKAAFGAPSAIGAAGGSGFGAAGS
MGNKSSLWGTPTQSSEAKANPFSGGGGNSFGFAKFGQNGGTSSFSSFGSTGSAQASSGFA
SLGQGQQKSGFANLKSEPSFGSTVTVSSGTGSSLPSWGNTPAQQSSSIFGQPSKSSFNTA
SFESKASDMSDPNGTQRKRDEATPTPQAPASQGLFGLAGGFKLGTTFKSDGTATDDPAKP
AAPANGSFFGSDFANTLGTTGLKPPATPASEPPQYVSTTPASPPKQKLFPSDTPAKDSAT
PKAAPPVQEPATPFDDAPLPPDFTKSKPSKVDDAPLPPDFMNTKPSQSNGDDLPPLAGSP
GVEVEAPSSSVEASPIGNGENHSDYSEDDQDDDDDEEPDDTYPPNNASKSYQPKIGTQSS
YFPPAPTPPVMKSGGTSQSGRSTSPAQNSLFGQPTKPNGTQPSFGGNSLFGQQSVKAPFG
SRPNSSSASAKPPYPPSATNRSQNLRSPSPMRPSSSSRFRREPLVAPGASLSSSLQGSKP
PTPQPQVSDLEDEEDERMRAQLAQPIEPSRHLEEFVAYQNYTGGKSPNKSGHAAQIEMIY
KDINGMVDALGWNMRSIKAFTLYHQQPQPNHQVDRGMLEDILSQGHDGSWFEKFTLCEIQ
ALKSLEEDLEQELDAGRVQDVLDKLAQLARLLHEKAKLMTRLNDIRRQIINRKDPERIEA
LRKAPLPKELADGQKSLRNDYAQLLTSLRKAEDAVAVLRSRLATYNAQAGSTKAVPSMEA
VKKTILRLANLAEQKNNDILVLEAQMRKLGLAEPSRPSSSSSRTGTPRQSGRTSLRRSVA
DTPYATPPTGHKKLTLTELNRRALTPEVDNTPTPGKGYGLFYTPEGSPAAGGKDIARLSD
LVDENMDTLRETARSRKQVAKNLKGVLLERGIKVTRVN
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagagccatgcgccggcggtagaggttggggctgaggtgcccgagatcgagacg
gagcatctaggcttcaaagtccttagcaacggaaagcaaggtcccaagaaggtcaaactt
cttccccgaccatggcctgccgaaaatctgccctcggcctcggccaacctcctctccgtc
gcctccaagcctggtctccttgcagccgctggtcccaatgtcctcgtcattgcatctacc
gacgccgtgcgcaaagccttcgagggcaagacgatagccgacgacattgacaagcccgac
gatccacgactcgaggaacgcgacatcgacgtcgtgtcagacttcacacctgatgtcacc
atctccaccgagaatctgcgtcacgttgccttctctgccgacggagacttcctcgtcgtc
gctcccgaacagcaagcctccatttccatattcagtgtcgccgaagtcattaaaggtagg
aaagatgcggaacagacggtgcaaacagacgcgcctgtccgcgcccttctcccaaaccca
gcccccgagttcgagcatttcttcgctattgtcctggattctggcaagctccagatatgc
aatgttacggatggtgccaaaaagacgattcgcgatactgacgtcaactgtgctgcctgg
agtacgcgcggaaaggctgtagtctctggttcaaccgacggtacctgcgccattaatatg
accaatggagaactcaagggtgtcattcctcgcgcaccggatgtcgacgagagctacgag
gtgacgggagtgacatggctgaatacggaggagtttctcgcggtctactcaatcagggat
caagatccagagaacccagaacctaagaaattcagtgttatcaagtccgcgaaaggttgg
ggatccttcacataccatgccttcgcctgggatcctcttcccgaggcatttgaacccccg
cgacgaccccttcctgcccgcttctcatccacgcgactacgaaactggaagcccgatctt
gaagatatgctgattatcacatcctcgcacgccgattcaatcgccatacttgcttctaca
agtaacaagatctcccctaaccaacaaaaccttaaggagcttatgttggtcaacgttgac
gacaccaagaaggcgtctgtaccacgtacagcatacggagaagatgaattggacagcgtc
ttcattggtgaagcgctggatctttcaagcaaagagaagattttgcgtccaattccgagc
ctggaggaaatcaacgaagctccttggccattgccagcttacatggctctgacccatgaa
ggtcttctcacagcttggtgggtggtgtggaaccgctcaattgaagctggcgaacgctac
ccgggtctcatcttcaagagcgagtctacacaacgggagccaaccactacaccccgggct
catacccctgcatccaaacttcctgtcgctacttccacaacaccatttggacaaccttcc
acaccttcacacactccttttggcaagtcggcaaacactcctggaactcctggaattcca
cactttggcaatgctggacacaactccccatcccctgctctgatgaggcctacgccacca
ggcttcggcacacctgggtttggagcttcgacgtcaagcatacccacgcctacgttgagc
aaacctccacagcctgcgttcggtgcaccgactgcagtgggtggtgctgggaaagcagcc
tttggtgcaccatctgcgattggtgcagctggcggctctggatttggtgcagcgggcagt
atgggcaacaagtcatccctatgggggacgcctacccaaagttctgaggccaaggctaac
cctttctctggaggtggagggaactcgttcggattcgccaaatttggacagaatgggggt
acgtcgagcttttccagctttggcagcactggctctgcccaagcaagttcaggatttgca
tcactcggacaaggccaacaaaaatccggttttgctaatctcaagagtgagccgagcttt
ggttcaacagtcactgtaagttccggaaccggatcgtcgctgccttcttggggcaacaca
cccgcccaacagagcagctcgatcttcggacagccaagcaagtcttctttcaatacagct
tcgtttgagtcgaaggcatctgacatgagtgacccaaacggcacgcagcggaagagagac
gaggccacaccgacaccccaagccccagcatcgcaaggcttgtttgggcttgctggtggc
ttcaagctcggcacaactttcaagagcgacggcactgctaccgacgatccggcaaaacca
gctgcgcctgcgaatggctcgttcttcggaagcgactttgctaacacgcttgggacaacg
ggactcaagcccccggctacacccgcgagcgagcccccacaatatgtctccaccacacca
gcctcaccaccaaagcagaagttgttcccgagtgacactcctgccaaagacagcgcaacc
cccaaagcagcacctcctgtacaggagccggctacccctttcgacgatgcccctctccca
ccagacttcaccaagtcaaagccatccaaggtcgatgacgcaccactccctcctgatttc
atgaacaccaagccctcgcagtcaaatggtgacgatttgcccccgcttgcgggtagtcca
ggtgtcgaagtggaagctcccagttcttcagtcgaggcgtctccaattggcaatggagaa
aatcacagtgattactctgaggatgaccaggacgatgacgatgatgaggaacccgatgat
acctatccgccaaacaacgcctcaaaatcataccagccaaagattggtactcaatcaagc
tactttccccctgcgccaactcctcctgtcatgaagtctggaggtacctcgcaatccggc
cgaagcacatcaccggctcagaactctttgttcggacagcccactaagcccaatggaacc
cagccatcgtttggaggtaattcgttgtttggacaacaatctgtcaaagctccctttggt
agcagacctaattcctcatctgcatctgcgaagcccccttacccaccttccgctaccaac
cgctctcaaaaccttcgctcgcccagtccaatgcgtcccagctcgtcttctcgcttccga
cgtgagcctctggtcgcgcctggggcttcccttagctcttctctccaaggatccaagccc
ccaacaccccagccgcaggtttccgatctggaggacgaggaggatgagagaatgcgtgcc
cagcttgcgcagcctatcgagccaagtcgccatcttgaggaattcgtagcataccagaac
tacacaggcggtaagtcgcctaacaagtctggtcacgctgctcagatcgaaatgatatat
aaggacatcaatggcatggtagacgctttgggctggaacatgaggtcgatcaaggccttt
actctataccatcagcaacctcaacctaaccaccaagtcgatcgaggcatgctggaagat
attttgtcccaaggacatgatggatcgtggttcgagaagttcacactgtgtgagatacaa
gcattgaaatctctcgaggaagatttggagcaggagcttgacgccggtcgagtgcaggac
gtactcgataagctagcacagcttgctcgcctcctccacgagaaggctaagctgatgact
cgtctcaacgatattcgtcgccagatcatcaaccgcaaggatcctgagagaatcgaggcg
cttcgcaaagcacccttgccaaaggagctagcggatggacaaaagagtctgcgcaatgac
tacgctcagctactcacatcgctgcgcaaggctgaagatgccgttgctgtccttcgttct
cgccttgctacttacaatgcccaggctggcagcaccaaagctgttccttctatggaagct
gtcaagaagacaatcttgagactggccaatcttgcggagcagaagaacaacgacattctc
gttctcgaggcgcaaatgcgtaagctgggtcttgccgaaccgagtcgtccatcgtcttcc
tcttcacgcactggtacaccacgacaatccggccggaccagtctgcgtcgcagtgtcgct
gacacaccatatgctacacctcccacgggccataaaaagcttactctgactgagttgaac
cgtcgcgctcttacccccgaggtcgataatacgccaactcccgggaaaggctacggcttg
ttttacacacctgaaggaagtcccgcagccggcggaaaagatattgctcgtttgtcagac
ctcgtcgacgagaacatggatactttgagggagacggcaagaagcaggaaacaagttgcc
aagaacctgaaaggtgttctcctggaacggggaatcaaggtcacaagagtcaattaa
DBGET
integrated database retrieval system