Chelonoidis abingdonii (Abingdon island giant tortoise): 116817022
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Entry
116817022 CDS
T07367
Symbol
COL8A2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
116817022
NCBI-ProteinID:
XP_032622640
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MLSEAVSLLLLVAGIRLVSGGGAGGGGYAQVKYMQPMVKGPLGPPFREGKGQYLDMPPLL
PMDLKGEPGPPGKPGPRGPPGPPGYPGKPGTGKPGLHGQPGPAGPPGFSGVGKPGIPGLP
GKAGMKGMPGLKGEPGMRGEQGQRGLPGPPGLPGPAGISVNGKPGMQGTPGLPGFRGEPG
PKGEPGPRGERGLKGENGIGKPGFPGPRGNGGPPGPAGPPGPNGIGKPGFDGLPGAPGGK
GETGPSGAPGINGEPGPMGPRGPPGIDGIGIPGVGGVPGMQGPMGPKGEPGIRGLPGLPG
PAGYGKPGLPGLKGDRGQPGIPGAIGDKGEPGIDGEAGEQGPQGVIGPPGVPGSMGLPGK
YGLPGLKGEVGLPGPPGIPGMRGDQGPNGFAGKPGVPGERGLPGSQGPPGPTGPKGEPGF
TGVPGVPGLTGSLGPKGDAGIPGQPGLRGPSGIPGLQGPSGPMGPQGLPGLKGEPGLPGP
RGEGKVGEPGITGPIGPPGIPGTRGLNGPPGPPGPPGPPGAPGVFDETGIAGLHLPDGGV
EGAVLGNGKPGKPQYGKGELSARIAPAFTAILTSPFPASGMPVKFDRTLYNGHNAYNPAT
GIFTCPISGIYYFAYHVHVKGTNVWVALYKNNVPATYTYDEYKKGYLDQASGSAVLELKE
NDQVWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgctctccgaagctgtctcattgctgctgcttgtggctggcatccgcttggtgtccgga
ggaggcgctggaggtggaggatatgctcaagtgaaatatatgcagcccatggtgaaaggg
cccctgggccccccattccgggaaggcaaagggcaatatctcgacatgccaccgctcctg
ccaatggatctcaaaggggagccaggccccccaggaaaaccaggcccaagaggacctcca
ggccccccaggctatccaggaaaaccaggcactgggaaacccggacttcacggccagcca
ggccctgctggcccccctggattttctggtgttggcaaaccaggtatcccagggctccca
ggaaaggcaggtatgaaagggatgcccggcctcaaaggtgaacccggcatgagaggtgag
caagggcagaggggattacctggcccgccaggattgcctgggccagcaggcatctcagtc
aatgggaaaccaggcatgcagggcactccagggctaccaggatttcggggtgagcctggg
ccaaaaggggagccagggcctcggggggagcgtggcttaaagggtgaaaatggcattggg
aagccagggtttccgggtccccgaggaaatggaggaccccccggccctgctgggcctcca
gggccaaacggcattgggaaaccagggtttgatggcttaccaggtgctccaggggggaaa
ggcgagacgggcccatctggagcccctgggatcaatggggaacctgggccaatggggccc
cggggtccaccagggattgatggaataggcatcccgggcgtcgggggggttccaggtatg
caaggccccatggggccaaagggagaacctggtatccgtggccttcccggtttacctggc
cctgcaggctatgggaaaccaggtttgccaggcttaaaaggagatcgtgggcaacctggg
atcccaggagccattggcgacaaaggggaaccaggcatagatggggaagcaggtgagcag
ggtccgcagggtgtcattggaccccccggggtgccgggctccatgggtttgccaggcaaa
tacggactgccaggcctcaaaggtgaggttgggctgcctgggcccccaggaatcccaggg
atgcgtggagaccaagggccaaacggctttgcagggaaaccaggggtacctggagagaga
ggtttgcctgggtcacagggaccacctggccccacggggccaaaaggagaaccagggttc
acaggagttcctggggtgccagggttaacaggtagcctaggaccaaagggagatgcagga
attccaggccagccaggcctgaggggcccatctggtattccaggcctccaaggcccttct
ggtcccatggggccacaaggcttaccagggctgaaaggggaacctggcctcccaggccct
cgaggggaggggaaggtaggggagcctggcattacaggacccattggcccacctggaata
cctgggacacgtggattaaatggacccccaggacctccagggccgcctggtccccccggg
gcaccaggggtgttcgacgagacaggcatcgctgggctgcacttgccggatggaggtgtg
gaaggagcggtgttagggaatggtaagcctgggaaaccgcagtatggcaaaggggagctc
tctgcccggatagcacctgctttcaccgccatcctgacctccccgttcccagcctctggc
atgccagtcaaattcgacaggactttgtacaacgggcacaacgcctacaatccagccact
gggatattcacctgccccatctccggcatctattactttgcctaccatgtgcacgtcaaa
gggactaacgtctgggtggcgctttataagaacaatgtgcccgccacatacacctacgac
gagtacaaaaaaggctacctggatcaagcctcaggcagcgcagtgcttgaactcaaagag
aatgaccaagtctgggtccaaatgccctcggaccaagccaatgggctgtactccacagaa
tacatccactcctccttctccggcttcctgctttgccccacataa
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