Chelonoidis abingdonii (Abingdon island giant tortoise): 116820316
Help
Entry
116820316 CDS
T07367
Symbol
RIMS1
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cabi04131
]
116820316 (RIMS1)
Membrane trafficking [BR:
cabi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116820316 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
116820316 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
FYVE_2
PDZ
PDZ_6
Nudix_N_2
Motif
Other DBs
NCBI-GeneID:
116820316
NCBI-ProteinID:
XP_032628562
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MSSSVGPRGPRPPPVPPPMQELPDLSHLTEEERNIIMAVMDRQKEEEEKEEAMLKRLHQQ
FESYKEQVRKIGEESRRYQGEHKDDAPTCGICLKTKFADGCGHLCSYCRTKFCARCGGRV
SLRSNNEDKVVMWVCNLCRKQQEILTKSGAWFFGSGPQPPSSQDGALSDTATGGSSDAPR
EKKAKLQERSRSQTPLSTAAASSQEISSSVQSDRRKGAELSQQAMGLEQKQASSRSRSEP
PRERKKTALISEQNGKVGLKSERKRVPKSSLQQGQADDREHKERHESRRLEKGRSQDYPD
LPEKPKEGKVADEEKQRKEDEYHTRYRSDPNLARYPVKPHPEEQQMRMHAKVSKARHERR
HSDVALAHTEVEEAEVPENKLRKRSQLQGTQERKSLMETQRSYSIERPGDVRISVSKQLA
NHSPPTPRHSPVPTEHLESKNRDSFKKQSRLDPSSAILMRKAKREKMETMLRNDSLSSDQ
SESVRPSPPKPHRSKRGGKKRQMSVSSSEEEGASTPEYTSCEDVEIESESVSEKGDLDYY
WLDPATWHSRETSPISSHPVTWQPSKEGDRLIGRVILNKRTTMPKESGALLGLKVVGGKM
TDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWNGKALPGATNEEVYNIILESKSEPQV
EIIVSRPIGDIPRIPESSHPPLESSSSSFESQKMERPSISVISPTSPGALKDAPQVLPGQ
LSVKLWYDKVGHQLIVNVLQATDLPPRGDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKNL
EPKWNQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDEPHWY
KLQTHDESSLPLPQPSPFMPRRHVHGGESTSKKLQRSQRISDSDISDYDVDDGIGVVPPV
GYRSNTRESRSTTLTVPEQQRTTHHRSRSVSPHRGDDQGRTRSRLPNVPLQRSLDEIHQM
RRSRSPTRHHDASRSPVDRRSRDMDSQYLSDHESELLMLPRAKRGRSAECLLTTRNSVRH
YKTLPPKMPLLENGTHWNIYSSTLPACAKTKSVIRQDISLLCDCHNAEIPRFTDELLVSE
LQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLERRRPTSPRIHIQHASPEDDRTRT
LESCIPKQDSVNHLSAKPGATQRQSRKLERYNSQKQTRKDSASETERVLLPCLSRRGLPA
PRTTEQPVIRGKHHTRSRSSEHSSVRPLCSVHHLVPGGSAPPSPLLTRIHQQGSPAQSPP
TDTSFSSRRGRQLPQVPVRSSSVEQASLVVEEQTRQMKMKVHRYNQTTGSGSSQEYEREQ
YTKYNIQTDQYRSCDNVSAKSSDSDVSDVSAISRTSSASRLSSTSFMSEQSERPRGRIRS
KSLEICKTDGKRERRISWELDDQTGHSEKKLDMEDKKKRRHSVADLSTFTPKMQGRRMGT
SGRTITKSTSVSGEMYKLEHNDGSQSDTAVGTVGTGGKKRRSSLSAKVVAIVSRRSRSTS
QLSQTEAGNKKLKSTIQRSTETGMAAEMRNRMVRQPSRESTDGSINSYSSEGNLIFPGVR
LGADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMVDKKGQLEVEVIRARGLTQKPGS
KSTPAPYVKVYLLENGACVAKKKTRIARKTLDPLYQQTLVFDESPQGKVLQVIVWGDYGR
MDHKCFMGVAQILLEELDLSSVVIGWYKLFPPSSLVDPTLTPLTRRASQSSLESSTGPPC
IRS
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcggtggggccccgcggccctcgcccacccccggtgcctcccccgatgcag
gagctgcccgacctgagccacctgacagaggaggagaggaacatcattatggcagtgatg
gatcggcagaaagaagaggaagagaaggaagaggccatgctcaagaggttgcatcaacaa
tttgaaagttataaagagcaagtaagaaaaataggtgaagaatcccgccgctaccaggga
gagcacaaggatgatgcaccaacgtgcggaatctgtcttaaaacaaagtttgctgatggc
tgtggccatttatgctcttactgccggaccaagttttgtgcccgatgtggaggtcgtgtt
tctctacgatcaaacaatgaggacaaagtggttatgtgggtatgcaatttatgtcgaaag
caacaagaaatcttaacaaagtctggagcgtggttttttggaagtggtccacagccgcca
agcagtcaggatggagcactgagtgatacagctactggtggaagttctgatgcacctaga
gaaaagaaagcaaagcttcaggagcgttccagatctcagactcccttaagtacagcagct
gcctcatcacaggaaatctcttctagtgtgcagtctgacaggaggaaaggagcagaatta
tcacagcaagctatgggcctggaacaaaagcaagcttcatcaaggtctagaagtgaacct
ccaagagagaggaagaagacagcgttgatttcagaacaaaatggaaaagtaggtctaaaa
agtgagcgtaaacgtgtgccaaagtcttcacttcaacaaggacaagcagatgacagggaa
cataaagaaaggcatgaaagtagaagactggagaaaggaaggtcacaggactacccagac
ttgccagaaaaacctaaggaaggcaaggtggctgatgaggaaaaacaaaggaaagaagat
gagtatcacactcggtataggagtgacccaaatctggcaaggtatcctgtgaagccacat
cctgaggaacaacagatgcgtatgcatgcaaaagtttctaaagcacggcatgaaagaaga
cacagtgatgtagctttggcacatacagaagtggaggaagcagaggtacctgagaataaa
ttacgaaaacgctcacaattacagggaactcaggaaagaaaatctcttatggaaactcag
agatcatactctatagaaagaccaggtgatgtaagaatttctgtttctaaacaattagct
aatcatagtccaccaactcccagacatagtccagttcctacagaacacctagaatccaag
aaccgtgattcctttaaaaaacaaagtcgccttgatcctagctctgctattctcatgcga
aaagcaaagcgggagaaaatggagaccatgctaaggaatgattcccttagttctgatcaa
tcagaatcagtgcgtccatcccctccaaagcctcatagatcaaaaagaggtggaaagaaa
aggcagatgtcggtcagtagctcagaagaagaaggggcatcaacaccagaatatactagc
tgtgaagatgtggaaatagaaagtgaaagtgttagtgaaaaaggtgacttggattattac
tggctggatcctgccacgtggcacagtagagagacatcccctattagttcgcatcccgta
acgtggcaaccatctaaagagggagatcgcttaattggacgtgttattcttaacaagaga
actaccatgccaaaagagtcaggtgcattactggggctaaaagttgttggaggaaaaatg
acagatttaggacgacttggtgccttcattaccaaagtaaagaagggtagtctagcggat
gtggtgggacatctaagagcaggggatgaagttctagaatggaatggtaaagccctgcct
ggagctacaaatgaagaagtttacaacattattttagaatccaaatcagaacctcaagtt
gaaattattgtttcaaggcctattggtgacattccaaggattcctgagagttcccatcct
cctctagagtctagttcaagttcctttgaatctcagaagatggaaaggccttctatttct
gttatttctccaactagtcctggggctctaaaagatgcaccacaagtcctaccagggcag
ctttctgtgaaactatggtatgacaaagtggggcatcagttaatagtaaatgttctacaa
gcaacagatctgccaccaagaggagatggacgtcccaggaatccttatgtaaaaatgtat
tttcttccagatagaagtgataaaagtaaaaggaggaccaaaacagtaaagaaaaaccta
gaaccaaaatggaaccaaacttttctctattcacatgtacatcgtagagattttagagaa
cgaatgttagaaataaccgtatgggaccagccaagagtacaagaagaagaaagtgaattt
cttggagagatccttatagagctggagacagcccttttagatgatgaaccacattggtat
aagctgcagacacatgatgaatcctcactacctctgcctcagccatcacctttcatgcca
cggagacatgtccatggtggagaaagcactagcaaaaaattacaaagatctcagcgaatc
agtgatagtgacatctcagattatgatgttgatgatggtattggagtagttcctccagta
ggttatagatctaatactagagaaagtagatctacaacgttaactgtgccagaacagcaa
agaacaacacatcatcgttcacgatctgtatctcctcaccgtggtgatgatcagggcagg
acccgttcacgtttaccaaatgtgccattacagaggagtttagatgaaattcatcaaatg
agaagatcacgttctccaactagacaccatgatgcctcccgaagtccagttgatcgcagg
tccagagacatggatagtcagtatttgtcagatcacgaaagtgagcttcttatgctgccc
agagcaaaacgaggaagaagtgcagagtgcctacttaccaccagaaattctgttaggcac
tataaaacattaccacccaagatgcctttactagagaatggtactcactggaatatttac
agctcaactctgcctgcatgtgctaaaaccaaatcagtgattagacaggatatttcactc
ctttgtgattgccataatgcagaaataccgagatttacagatgaactattggttagtgaa
ctacagccctcccttgacagggctaggagtgctagtaccaactgcttgagaccagatact
agtttgcattcaccagaacgagaaaggggtagatggtccccctccctagagaggagacga
cctactagtcccaggattcatatccagcatgcatctccggaggatgacagaacaaggacg
ctggagtcttgcattccaaaacaagacagtgtaaaccacctaagtgctaaacctggagca
acacagagacagtccagaaaactggaaagatataacagccaaaagcagactaggaaagac
tccgcttctgaaacagaaagggttctactaccatgtctttctagaaggggacttccagcc
ccaagaacaactgagcaaccagtcattaggggaaaacatcacactcgctcaaggtcgagt
gagcattctagtgtcagaccattatgctctgtacatcatctagttccaggagggtcggcg
ccaccttctccacttctgacaagaatacaccaacaaggaagtccagctcagtcacctcct
acagacacatcattcagcagtcgtaggggaagacagcttccacaagttccagtaagaagc
agcagtgtagagcaagcaagcttagtagtggaggaacaaacgcgacagatgaaaatgaaa
gtgcatcgttataatcagacaacagggtctggttctagccaagaatatgagcgtgagcaa
tataccaagtataacatacaaacagatcagtacagaagttgtgataacgtgtctgccaaa
tcatcagatagtgatgtcagtgatgtgtcagccatttcccgtaccagcagtgcctcacgc
ctcagcagcacaagctttatgtcagagcaatctgagcgccctaggggcagaatcaggtca
aagtccttagagatctgcaaaactgatggcaaaagagaaagaaggatatcatgggaatta
gatgaccaaacggggcacagtgaaaagaaattggatatggaagacaagaaaaagagaagg
cattctgttgctgatttgagtacgtttacccctaaaatgcaaggcagacggatggggact
tcagggagaaccatcacaaaaagcacaagtgtgagtggagagatgtacaaactggaacat
aatgatgggagtcaatcagacactgctgtcgggacagttggaacaggtgggaagaaaaga
cgatccagtctcagtgccaaagtggttgccatagtatctcgaaggagcagaagcacatct
caacttagccaaacagaggctggcaacaagaagctaaaaagcacgatacagagaagcaca
gaaacagggatggcagcagaaatgaggaatcgtatggttcggcagccaagtcgggagtcc
actgatggcagcataaacagttacagctccgaggggaatctaatattccctggagtgcgg
ctgggtgctgacagtcaatttagtgatttccttgatggccttggacctgcacagttagta
ggtcgacagacactagcaacccctgctatgggtgatattcagattggaatggtggataaa
aaaggccagttagaagtagaagtcattagagcccgaggcctcacgcaaaaacctggctcc
aaatctaccccagctccctatgtcaaagtatacctgttggaaaatggagcctgtgtagcc
aagaaaaagacaagaattgcacggaaaacacttgatcctctgtaccaacagacactggtt
tttgatgaaagtccacagggtaaagtccttcaggtgatagtttggggagactatggccga
atggatcacaaatgcttcatgggtgttgcacagattcttctggaggaactggatctgtcc
agtgtagtaataggatggtataaattatttccaccctcttcactagtggatccaaccttg
actcccctgacccgcagggcttcccagtcatctctggaaagttcaactgggcctccgtgc
attagatcatag
DBGET
integrated database retrieval system
