Chelonoidis abingdonii (Abingdon island giant tortoise): 116824274
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Entry
116824274 CDS
T07367
Symbol
LAMC1
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116824274 (LAMC1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116824274 (LAMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
MscS_porin
Laminin_I
Motif
Other DBs
NCBI-GeneID:
116824274
NCBI-ProteinID:
XP_032635359
Ensembl:
ENSCABG00000018973
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MCRRALPLLLLLELAGRCVAAMDECADEASGRPQRCMPEFVNAAFNVTVVATNTCGSPAE
EYCVQTGVTGVTKSCHLCDAAQPHLQHGAAFLTDYNQADTTWWQSQTMLAGVQYPSAINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWVPYQYYSGSCENTYQKLNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSAVLQEWVTATDIRVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNDFGKLSCNCKHNTFGED
CEKCLPFYNDRPWRRATAESANECLSCNCNGRSQECYFDAELYRSTGHGGHCIGCLDNTD
GANCERCREYFYRLGNEKGCLPCNCNAVGSLSTQCDNYGRCSCKPGVMGDKCDRCQPGFH
SLSEAGCRVCSCNPAGSTDDCSIETGRCTCKDNVEGFHCERCKPGFFNLDPANPRGCTPC
FCFGHSSVCTNAIGYSIYSIVSNFQTGEEEWRAEQQDGSEILLQWSAETQDISVISDSYF
PIYFIAPGKFLGNQVLSYAQNLTFSFRVDRRDTRLSAEDLVLEGDGLRISVPLIAQGNSY
PSENTVKYAFRLHEATDYPWRPSLTPFEFQKLLYNLTSIKIRGTYSERSAGYLDDVTIVS
ARPEPGTPATWVESCTCPAGYHGQFCEHCASGYRRETPSLGPYSLCVLCTCNGHSESCDP
ETGACDCRDNTAGPHCEKCSDGYYGDATTGIPSDCQPCPCPGGSSCAIVPKTKEVVCTSC
PAGTTGKRCELCDDGYFGDPLGENGPARLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYN
TAGFYCDRCKDGFFGNPLASSPEVKCKACSCNPYGTVNQQTSCNQVTGQCECLPRVTERD
CSTCEPGFYNLQSGRGCDRCDCHPLGSTDGHCDIQTGQCECQPGIAGQRCERCEVNHFGF
GPEGCKPCDCDTEGSHSLQCKEDGRCECKEGFVGSRCDQCEENYFYNRSWPGCQECPACY
RLVRDKVAEQRERLQELENLIANLGTGDETVTDQAFEDRLKEAERDVTDLLRDAQNSKDV
DQGLMDRLKEINSTLASQLDRLQNIQNTVRETEALAEQSRERVQATEDLIEVASNMLEKA
KMAVANVSITPPVSSGDPNNMTLLAEEARKLAERHKQEADDIVRIAKAANDTSTEAYTLL
LKTLAGENQTASDIDELNRKYNQAKNISRDLEKQANKVHAEAEEAGNKALQIYANLTSLP
AVDSKGLENEANKIKKEAEELDQLIDRKLKDYEDLREDMKGKELEVKNLLEKGRTEQQTA
DQLLARADAAKALAEEAAKKGRKTLEEANDILSNLRDFDKRVNDNKTAAEEALKKIPAIT
QTIAEANNKTRQAELALGNAADDAREAKNKADDAEKIANSVQKNAANTKSEADKTFSDAT
ELDKEVDDMLKQLQDVEKELKRKQEDADQDMMMAGMASQAAQEAEDNARKAKNSVNSLLT
IINDLLGQLGQLDPVDLNKLNEIEGTLNTAKDQMKDSDLDRKVTELEDAARRQDEAIQAY
NRDIEDILKDINNLEDIKKTLPSGCFNTPSIEKP
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgccgggcgctgcctttgctgttgctgctggagctggccgggcgctgcgtcgcc
gccatggatgaatgcgcggacgaggcgagcgggcggccgcagcgctgcatgcccgagttc
gtgaacgccgccttcaacgtgaccgtggtggccaccaacacgtgcggctcgccggccgag
gagtactgcgtgcagaccggcgtgaccggggtcaccaagtcctgccacctgtgcgacgcc
gcccagccccacctgcagcacggcgccgccttcctcaccgactacaaccaggcggacacc
acttggtggcagagtcagaccatgctggccggggtgcagtaccccagcgccatcaacctc
accctgcacctgggaaaggcctttgacatcacatatgtgcgcctgaagtttcacaccagc
cggcctgagagctttgccatctacaaacgtaccagggaagatgggccgtgggtgccttat
cagtactacagtggctcttgtgagaacacatatcagaaattaaaccgaggctttatccgg
actggggaggatgaacagcaggcactctgcacggatgagttcagtgacatctctccactc
acaggtggcaatgtggctttttcaacgctggaggggcggcccagtgcctacaattttgac
aacagtgctgtgttacaggaatgggtgacagctactgacatcagagtgaccctcaatcgt
ctgaacacctttggagatgaagtattcaatgatccgaaagttctgaagtcctattattat
gcaatttcagattttgctgtgggtggcaggtgcaagtgcaatggccatgcaagcgagtgt
gtgaagaatgactttgggaagctgtcgtgtaactgcaaacacaacacttttggggaagac
tgcgagaagtgccttcccttctacaatgacaggccatggagaagagcaacagcagagagt
gccaatgaatgtttgtcctgtaactgcaatgggcggtcacaggagtgttactttgatgct
gagctgtaccgctccacgggccatggtggtcactgcattggctgcttggataacactgat
ggtgccaactgtgaaaggtgccgggagtacttctaccgccttggaaatgagaaaggatgt
ctaccatgtaactgtaacgctgttggctctctcagcactcagtgtgataactatggccgg
tgcagctgcaaaccaggtgtgatgggagataaatgtgaccgatgccagccagggttccat
tccctctcagaggctgggtgcagggtatgttcatgcaatcctgctggcagcacagatgac
tgcagtattgaaacaggacgatgtacctgcaaggacaacgtggagggattccactgtgag
agatgtaaacctggatttttcaatctggatccagccaatccgaggggctgcaccccttgc
ttctgttttggtcactcctcggtctgcaccaatgccattggctacagtatctacagcatc
gtctccaacttccagactggggaggaagagtggcgtgctgaacagcaagatggctctgaa
attttactccagtggagtgcggaaacccaagacatctctgttatctcagacagctatttc
cctatctatttcattgcacctggcaagtttttgggcaaccaagttttgagttatgctcaa
aatctgaccttctcctttcgggtggataggcgggacactcgtctctctgcagaggacctg
gtgcttgaaggggatgggcttagaatatctgtgcctcttattgctcagggcaattcctat
cctagcgagaacacagtgaagtatgccttcaggctccatgaagcaacagattacccgtgg
aggccttctcttaccccatttgaatttcagaagctgctttacaacttgacttctatcaag
atccgtgggacatacagtgagagaagtgctggatacctggatgatgtcactattgtgagc
gctcgtcctgagccaggaacccctgcaacctgggtggagagctgtacctgcccagcagga
taccatgggcaattctgcgagcactgtgcctcaggttataggagagagacacctagcctt
gggccatacagtctgtgtgtgctatgtacctgtaatgggcacagtgagagctgtgaccca
gagactggtgcttgcgactgcagagataacacggcaggccctcactgtgagaagtgtagt
gatgggtattacggagatgcaactacaggcattccctcagactgtcagccttgtccatgt
ccagggggctccagctgcgccatagtgcccaagactaaggaggtggtgtgcaccagctgt
cctgctggaaccacaggtaaaagatgtgagctatgtgatgatggctattttggagatcca
cttggtgaaaatggccctgccaggctttgccgtctctgccagtgcaatgacaacattgat
cccaatgccgtggggaactgtaaccgcttgacaggggaatgcctgaaatgcatctacaac
acggctggcttctactgtgaccggtgtaaagatggtttttttgggaaccccttagcctcc
agcccggaggttaaatgcaaggcgtgcagttgtaatccttatggcacagtaaaccagcag
acaagctgcaatcaagtaactggacagtgtgagtgcctgccacgtgtcaccgagagggac
tgtagtacctgtgagcctggcttctacaacctacagagtggacgtggctgtgacaggtgt
gactgccatccactgggttccaccgatggccattgtgacatacaaacaggacagtgtgaa
tgtcaaccaggcatcgccgggcagcgttgtgagagatgtgaggtcaaccacttcggattc
ggacctgaaggctgcaaaccatgtgactgtgacaccgagggctctcactccctacagtgc
aaggaggatggtcgctgtgagtgtaaggaaggctttgtggggagccgttgtgaccagtgt
gaagagaattatttctacaatcggtcctggcctggctgtcaagaatgtcctgcgtgctat
agactggttagagataaggtggcagaacaacgtgagaggctgcaggagctggaaaatctt
atagcaaaccttggtacaggagatgaaacagtgactgatcaggcctttgaggacagactg
aaggaggcagagagagatgtcacagacttgctccgagatgcacagaacagcaaagatgtg
gatcagggcctgatggatcgtctcaaggaaattaacagcactctggcaagccagcttgac
cgattacagaacatccaaaatacagtgagggagactgaagccctagctgagcaatcccga
gaacgggtgcaggccacagaagacttgattgaagtagcttctaatatgctagagaaggca
aagatggcagttgccaatgtgtccattaccccaccagtctccagtggtgacccaaacaac
atgacactcttggcagaagaggctcgtaaactggctgaacgacacaaacaagaagctgac
gatattgtgcgcatagcaaaggcagcaaatgatacatccacagaagcgtacacattgctg
ttgaagacactggcaggagagaaccaaactgcgagtgacatagatgagctcaacaggaag
tataatcaagcaaagaacatttctcgagacctagagaaacaggctaataaggtgcatgcg
gaggcagaggaagctggaaataaggccctgcagatctatgctaatctcaccagtcttcct
gctgtggactccaagggtctagagaatgaggcaaataagatcaagaaggaagcagaggag
ctggatcagctcattgacaggaagttgaaggattatgaggatttgagagaggacatgaaa
gggaaggaactggaagtgaagaatctcttggagaaaggaaggactgaacaacagactgct
gaccagctgctggcccgagcagatgctgccaaagctctggctgaagaagctgccaagaag
ggaagaaagacgctagaggaggccaatgacattctcagcaacctgagagattttgacaag
cgtgtgaatgataacaagacagctgccgaggaggcattaaagaagattcctgccattact
caaaccattgctgaggccaataataagacaaggcaagcagagctggcgcttggtaatgct
gctgatgatgccagggaagccaagaacaaagcagacgatgctgagaaaattgctaattct
gtccagaagaatgctgccaatacaaagtccgaggccgacaagactttctctgatgcgaca
gagctagacaaagaagtggatgacatgctgaaacagctgcaagatgtcgagaaggagctg
aagaggaagcaggaggatgctgatcaggatatgatgatggcaggcatggcttcacaggct
gcccaagaggcagaagacaatgcgagaaaagctaagaactctgttaacagcttgctcacc
atcattaatgaccttctgggacagttagggcaactggacccagtggacttgaacaaactg
aatgagatcgagggtaccttgaacacagccaaagatcagatgaaagatagtgacctggac
cggaaagtgaccgaattggaggatgcagccaggcggcaggacgaagccatacaggcctac
aacagggacattgaggatatcctgaaagacattaacaacctggaagatatcaagaagacc
ttgccgtctggctgtttcaacaccccgtccatcgagaaaccctaa
DBGET
integrated database retrieval system