Chelonoidis abingdonii (Abingdon island giant tortoise): 116827069
Help
Entry
116827069 CDS
T07367
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116827069 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cabi03036
]
116827069 (MBD4)
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116827069 (MBD4)
Chromosome and associated proteins [BR:
cabi03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
116827069 (MBD4)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116827069 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
116827069
NCBI-ProteinID:
XP_032640145
Ensembl:
ENSCABG00000001485
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSTGLGFSWLRALGEDWNSDKSDMPIGKNTQEEGKELVTETREYFGLQIEGTETIAENTL
QCKEDAAAVSEVASRCLKNIPDGWEKITKQRQSGKTAGKYDVYFISPQGAKLRSRCALVA
YFSKNGETVLKPEDFDFTAPVQSKTRSRAKGFSAEAVGPRLQNKECNSKAQDLSVQSNKE
EFKVLELQTSNEQLENISIHLQGREDLVIKDIKPKDCCIKAKEKRAVGRRAQIKKARKGS
EKRNPDHSQNKRQRKASCNNQEAEGSQIKKFRRKKDVCISDRGRIDNQNLNPTDIGKANT
LSKDEIMTSGSQSEMPLGPVTALSETESRTMGQLGYAEKSSDDAAATNSDKNIAEREGLS
AFAKEKDWVHSDNQDFKPSTETDISISQPCGKKSFTSVKILQEDCLPRTQVERRKTSPYF
SSKYSKEAPSPPRRKAFRKWTPPRSPFNLVQETLFHDPWKLLIATIFLNKTSGKMAIPVL
WEFLEKYPSPEVARTADWKEMSELLKPLGLYELRAKTIIKFSDEYLTKQWRYPIELHGIG
KYGNDSYRIFCINEWKEVHPQDHKLNTYQAWLWENHEKMSLN
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgggctgggtttcagctggctgagggccctgggcgaggattggaacagtgat
aagagtgacatgccaattggaaagaacacacaagaagaggggaaagaattagtgacagaa
acaagagaatattttggtctacagattgaaggtactgagaccatagcagaaaacacactc
cagtgcaaagaagatgcagctgctgtgtcagaagtggcttctagatgtctcaaaaacatt
ccagatggatgggagaagatcacaaagcaacgacaatcaggcaaaactgcagggaaatat
gatgtttatttcatcagtcctcaaggagcaaagttaagatccagatgtgcacttgtggcg
tattttagtaaaaatggagagactgttcttaaaccagaagattttgactttactgctcct
gttcagagcaaaactcgatcaagagccaaaggattcagtgcagaagctgtgggaccaaga
ttacagaataaagaatgtaacagtaaagcgcaagatcttagtgtgcaaagtaataaagaa
gaatttaaagttttggagttacagaccagtaatgaacagctagaaaacatttccatccat
ctgcagggcagggaggacttggtcattaaagacattaagccaaaggactgttgcataaag
gccaaagaaaaaagagcagttggaagaagggctcaaattaagaaagctagaaagggctca
gaaaagaggaatccagatcacagccaaaataaaaggcagagaaaagcatcatgtaataat
caagaggctgagggcagccaaatcaaaaaattccggcgaaagaaagatgtttgtatttct
gatagaggtagaatagacaatcagaacttaaaccccacagatattggaaaagcaaacaca
ctttcaaaggatgaaataatgacttcaggatcacaatcagagatgcctcttggaccagta
actgctctctcagaaacagagtcaagaaccatgggacaattaggatatgcagagaagagt
tctgatgatgcagctgctacaaactctgacaagaacattgcagaaagagaaggattgagt
gcgtttgcaaaagagaaggattgggtgcattcggataaccaggatttcaaacctagcact
gaaacagacattagcatttcacagccttgtggcaagaaaagctttacatcagtgaaaatt
ctgcaagaagactgtctcccaagaacacaagtagagagaaggaaaaccagtccatatttt
tctagtaaatacagtaaagaagctccaagcccaccaagaaggaaggccttcaggaaatgg
actcctcctcgatctccatttaatttggtccaagaaacactcttccatgatccgtggaag
ctcctcatcgccaccatatttctcaataagacctcaggtaagatggcaatacctgtgctc
tgggagtttctggagaaatatccttcccctgaggtagcaagaactgcagactggaaagaa
atgtcagagttgcttaaacctcttggcctctacgaactcagagcgaagaccattatcaaa
ttttcagatgagtatctgaccaagcaatggaggtatcctattgagctgcatgggattgga
aagtatggcaatgattcatacagaatcttctgtatcaatgaatggaaggaggtacatcca
caagatcacaagttaaatacataccaagcatggctctgggaaaaccatgaaaaaatgagt
cttaattga
DBGET
integrated database retrieval system
