Chelonoidis abingdonii (Abingdon island giant tortoise): 116829507
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Entry
116829507 CDS
T07367
Symbol
USP38
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 38 isoform X1
KO
K11854
ubiquitin carboxyl-terminal hydrolase 35/38 [EC:
3.4.19.12
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cabi01002
]
116829507 (USP38)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cabi04121
]
116829507 (USP38)
Enzymes [BR:
cabi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116829507 (USP38)
Peptidases and inhibitors [BR:
cabi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
116829507 (USP38)
Ubiquitin system [BR:
cabi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116829507 (USP38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Usp38-like_N
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
116829507
NCBI-ProteinID:
XP_032644266
Ensembl:
ENSCABG00000001551
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MDKILEGLVSSSHPLPVKRVIVRRVVESAETPLSQAQCRAMFALSTRLILQGPDSFQRQV
GRQVLEAYARFHRDEFEAFFNRGLVLGLLQRGYGGLGSRDPAILDYVQAGLRLIISCPSV
LELFALLQVEALRMVCERPAPPLCARLCQLLGDFPQCLPRGRKLSLAFCQQLVRSIAHFQ
SQGSRESELRLYVSQVTQVSGLLRSIWKAEPDTLLPSLQELFAVISSTDTSFEPSVALAS
LVQHIPLQMITVLIRSLTTDPNVKDASMTQALCRMIDWLSWPLAQHVETWVIALLKGLAA
VQKFTILIDVTLLKIELVFNRLWFPLVRPGALAVLSHMLLSFQHSPEAFHLLVPHVVNLV
HSFKNNGLPSSAAFLVQLTELIHCMMYHYSGFPELYEPILEAIKELPKPSEEKIKLILNQ
SAWTSQSSSLPSCLSRFSGKSETGKTGLVNLGNTCYMNSVIQALFMATDFRRHVLSLNLN
GCNSLMRKLQHLFAFLAHTQREAYAPRIFFEASRPPWFTPRSQQDCSEYLRFLLDRLHEE
ERTLKALSSAKPSENMMSSESLAQETANKAQVFTEAPCTGGEERTLIEKMFGGKLQTSIC
CLNCKSTSQKEEAFTDLSLAFCPLTSLDNVDMRSITHSSEVKDDCMVQTGIVASSPVEES
ALDISLAVSDRCETVMNEGILKDHLPAELNSANVTDSDLYRVQDTKNVSQKPVSENTPSV
TDLLNYFLAPEILNGDNKYYCEKCTSLQNAEKIMQIMEEPEYLILTLLRFSYDPKCHIRR
KILDNVSLPLILELPVKRTASSLGVVSKGWSVDIEFSDTGENLAKKLKPSGAEEACCPEL
VPYVLSSVVVHSGISSESGHYYSYARNITGSGPSLGLCHQSKNMALASHGSLLAGEVSHA
VIENDLDANEMSKEWFLFNDSRVTFTSFQSVQKITSRFPKDTAYVLLYKKQNCSNGFNAN
SANGLWVNGDPPLQKELMDAITKDNKLYLQEQELSARTQALQAASTSCSFRPNGFDDNDP
PGSCGPTGGGGGGGFSTIGRLVF
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatcctggaggggctggtgagctcgtcgcacccgctgccggtgaagcgagtg
atcgtgcggcgggtggtggagtcggcggagacgccgctgagccaggcccagtgccgggcc
atgttcgccctcagcacccggctcatcctgcaggggcccgactccttccagcggcaggtg
gggcggcaggtgctggaggcctacgcccgcttccaccgcgacgagttcgaggccttcttc
aaccgcggcctggtgctggggctgttgcagcgcggctacggggggctgggcagccgcgac
cccgccatcctggactacgtccaggccgggttgcgcctcatcatcagctgtccctcggtg
ctggagctcttcgcgctgctgcaggtagaggcgctgcggatggtgtgtgagcggcccgcg
cccccgctctgcgcccgcctgtgccagctgctgggcgacttcccgcagtgtctgccccgc
ggcaggaagctctcgctcgccttctgccagcaactggtgcgcagcattgcccacttccag
agccagggcagccgggagtccgagctgcgcctctatgtttcccaagtcacccaggtcagc
ggcctcctgcgcagcatctggaaggccgagcccgacacgctgttgccttctctgcaggag
ctcttcgccgttatctcctccacagatacttcatttgagccttctgttgcactggcaagc
cttgtgcagcatattccattacagatgattacagtactcatcaggagccttaccacagat
ccaaatgtaaaagatgcaagtatgactcaagctctctgcagaatgatagactggctgtcc
tggcccctggctcagcatgtggagacatgggtgattgcgttgctgaaaggactagctgca
gtccagaaattcactattctcatcgatgttactttacttaagatagaactggtttttaat
cgactttggtttccgcttgtgaggcctggtgctctggctgtcctttctcacatgttgctt
agttttcagcattctccagaggcttttcacttgcttgttccacatgtggtcaacttggtt
cactcctttaaaaacaatggcttgccttccagtgcagctttcttagtgcagctgactgag
ttgatacactgtatgatgtatcattattcgggatttccagaactctatgaacctattctg
gaagctattaaggaattgcccaaaccaagtgaagagaagattaagttgattctcaatcaa
agtgcctggacttctcagtccagttcattgccatcttgtttgtctagattttctggaaaa
tctgaaactgggaaaacgggtctagttaacctaggaaatacatgttatatgaacagtgtt
attcaggcactttttatggccacagatttcaggagacatgtattatccttgaatctaaat
gggtgcaattcactaatgagaaaattacagcatctctttgcatttttggctcacactcag
agggaggcatatgcacctcggattttctttgaggcttccaggccgccatggtttactcct
agatcccagcaagactgctcagagtatctcaggtttctgctagacagacttcatgaagag
gagagaaccttgaaagctttgtcttcagcaaagccatctgagaatatgatgagtagtgag
tccttggcacaggaaactgccaacaaggcacaagtgtttactgaggcaccttgcacagga
ggtgaagaaagaacattgatagagaaaatgtttggagggaaactacagaccagtatatgc
tgtttgaactgcaaaagtacttctcaaaaagaagaagccttcacagatctatcgctggca
ttttgtcctctcacttccttggacaatgttgacatgcgaagtataacacattcttctgaa
gtgaaagatgactgcatggtgcaaactggtattgtagcatccagtcctgttgaagaatca
gcacttgatatatctctggcagtaagtgatcgctgtgaaacagttatgaatgaaggaatt
ctgaaagaccaccttcctgctgagttgaactctgcgaatgttacagattctgatctgtac
agagttcaggatactaagaatgtgtctcagaagccagtaagtgaaaatactccctcagtt
actgacttactaaattattttctggcacctgagattctaaatggagacaacaagtattat
tgtgaaaaatgtacctctctacagaatgcagagaaaattatgcaaatcatggaggaacct
gaatacctcattctcactctcctcagattttcatatgatccaaagtgtcatataaggcgc
aaaatcctggacaatgtgtctctaccacttattttggaactaccggtcaaaagaactgca
tcctctttaggtgtagtatcaaaaggctggtctgtggacattgaattctctgacactgga
gaaaatcttgctaaaaaactgaagccctcaggtgcagaagaagcgtgctgcccagaattg
gtaccctacgtattaagttctgttgtggtgcactctggtatatcctctgaaagtgggcat
tattattcttatgccagaaatatcactggttcagggccctccttagggctgtgccatcaa
tcaaaaaatatggctttagcttcccatggcagcttgttggcaggggaggtttcccatgca
gttattgaaaatgatctagacgctaatgagatgtcaaaagagtggtttctatttaatgac
agcagagtgacatttacctcatttcagtctgtccagaaaattaccagtaggtttccaaag
gacactgcttatgtgctattgtacaaaaaacagaattgtagtaatggcttcaatgccaat
tcagcaaatggactctgggtgaacggagaccctcctctgcagaaagagcttatggatgct
attacaaaagataataaactgtatttacaggagcaagaacttagtgctcgaacacaagca
ctacaagcagcctcgacgtcgtgctcttttcgacccaatggatttgatgacaatgatccc
ccaggaagctgtggaccgacggggggcggaggtgggggaggattcagtactattggtaga
ctagtgttttga
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integrated database retrieval system
