Chelonoidis abingdonii (Abingdon island giant tortoise): 116838390
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Entry
116838390 CDS
T07367
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116838390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
SLFN-g3_helicase
AAA_16
nSTAND3
DEAD
AAA_22
AAA_25
AAA_5
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
116838390
NCBI-ProteinID:
XP_032659418
LinkDB
All DBs
Position
Unknown
AA seq
2080 aa
AA seq
DB search
MGACTATPIPLVSEQLLPCGEMSGQKRRWLDWPESAWGQGPPKAARLSPEPGPSWRTDPC
TILTDLEKLCDHSPQQLLPFLLDHDFQLEQVVESPGLSPARVYTLLRALKVAVESAGEPE
LVQPVLAVVLRPAFVLRSLLGFIAELESFQHQDGQISQEVMEDTVAALHHLLTACPEQTK
TLLCYPVDLLFATAQRLQSRGFQFTWIIQKRLHDTKILVDSTFPQCSAPLASPAWQEDFH
TIPIFPTPEEIFVDPGQKLKRNLPVGKYASDTAYLDTHFRLLREDFVRPLRSGISAHFSL
QNVFGGAGKQRGLRVYRNVQLAKVGTSPVGAIYMARFQAPQGSSHTSSKRLLSGSLTCLI
SSDCGQVLFGTVVGGNRPELLKGAVWLDIKANHSDLLMRHLGKTNFIMVESPAFFESYRH
VLEGLQELDPTLVPFQNYIVQCRTPVAPPTHFGKDVTFDLSVLRPTGRADKEPMGDTSEG
HVTAVDLTAVRLGDSYIWSPETFPHLDKSQILAIRMALTREFVLIQGPPGTGKTFIGLQI
VEILLRNQSQWWKDQRPFLVVCYTNHALDQFMEGILQFQPSGVVRIGGRSRSDKVAACSL
RNLRQKQLPALLGAAEKHQYGWMRKALQKQKESITYRSAVLELLRRGILTDTELAAEIHD
DKLECSWRAGHFDMCDWLKIYPEAQEEKPCQAQGRGRKAGEWLGKGPGADSGYARSSSCT
AQAHRGIALLSSGDRMRVGAGVTHACIRKSPEYQDIWSPCPLPGAEEELWPCLRDERALD
DEDDLDPSEWRRSTVEEKFAYILPAESSSSHQEMRKCLEEGDIMTDEDVANVRDVGELRL
RDRWRLYRRWMLAYERQLKETLVEKLEEYEKKAAQLTELTFQEDLWVLKRSQVIGMTTTG
AAKYRKLLQKIQPHTVIVEEAAEILEAHVLTCLTPACKHLILIGDHQQLRPKPADYTLEK
KYFLGISLFERMINNQIPYVQLLYQHRMRPEISQLLVPLFYKQLKDHEAVAEYEQIKGVE
SSVFFIQHTAAESHSADSESYSNRFEASFLVSLSRYLLEQGYNESQVTILTPYHGQVLKI
RMLLRSRDMGDVAVHAVDDFQGEENDIILLSLVRSNREGRIGFLQDKNRLCVALSRARKG
FYCIGNLASIAAGSNSNLWKDILRLLKRKKLMGEGLTLVCQNHPDTKTVVNESSDFSKIP
DGGCMLQCQARLECGHPCTRRCHPYDRDHSLYLCQFPCSKLCELNHRCPRKCKEPCEPCS
VEVEKVIPKCGHLQTIPCHMPADHWLCQEPCKQLLECKHPCTRRCGEACSTCRCKEMIDV
TLPCSHVMRTECYKQKMPLSCLETCKQKLECGHHCKGNCYECVQGRLHVHCRNKCTRVLL
CSHQCQESCFENCPPCKRKCPNKCKHSHCDKPCGEICFPCIQPCSWKCRHYRCTQLCSEM
CNRPRCNEPCQKSLKCSHPCAGLCGEPCPPKCRTCHRDELAEIFFGDEDEPEARFIVLED
CGHVLEVRGLDRWMDGEPDNAHAQHVQLKVCPKCATPIQHNTRYNNVIKAIQQKIKEIKL
KIQGNKEELEAGKQQLLLRLNRDRDLVAWTGMERSIMNTVSRQSLLDLENTLNFLASLSR
LKQQAKKCTVARERNLKRKIEAVEHWISRNRYAFTAQQLRECRNEIKRISYLGNIFERLS
GYENKQASLPTEAMALANEAIGVLQRQDRFTQNQEESLQRVLEKIDELLPAAELQLSEAE
RVMITEAMQFGKGHWYRCPRGHLYTIGECGRPMQQSSCPECGATIGGQNHALTQDNVADD
QILESASAQEQEPRLQDSILALPRSRDQPWSLTCCPPSPHPQLDSPPPRPHSPHPQPDSP
PPCLPSPHPQPDSPPPPSPSPHPQPDSPPPRLRSPHPQPDSPPSRLPSPHPQPDSPPSRL
RSPHPQPDLLPPASPSPHPQPDLLPPAPRSPHPQPDSPPSRLPSPHPQPDSPPSRLRSPH
PQPDLLPPASPSPHPQPNSPIQPPLPAGLANPLPSEHMTVLQAENQNLRDHVWQLQTANF
SLQEHIAALRAAAGTRVSPCDTSWVTSPSSARRDADGAMV
NT seq
6243 nt
NT seq
+upstream
nt +downstream
nt
atgggggcttgtactgcaacaccgattcctcttgtctctgagcagctcctgccctgtgga
gaaatgtctggccagaagaggaggtggctggactggcctgagagtgcctgggggcaaggg
ccaccgaaagctgcccggctctccccagagccagggcccagctggaggacggatccttgc
accatcctcactgacttggaaaagctctgtgaccacagcccccagcaactcctacctttc
ctgctggaccacgacttccagctggagcaggtcgtggagagccccggcctgagccccgcc
agggtgtatacgctgctgcgggccctgaaggtggcggtggagagcgctggtgagccggag
ctggtccagccggtcctggccgtggtgctgagaccagctttcgtgctcaggagcctgcta
ggcttcattgctgagctggagagcttccagcaccaggacgggcagatctcccaggaggtg
atggaggacacggtggctgccctgcatcatctgctgacagcgtgccccgagcagacgaag
accctcctctgctaccctgtggaccttctctttgccactgcccagagactccagagccgc
ggctttcagtttacgtggatcatccagaaacggcttcatgacaccaagatcctggtggac
tcgaccttcccacagtgcagtgcgcccctcgcctcaccagcctggcaggaggatttccac
acgatccccattttcccaaccccggaggagatattcgtcgaccctgggcagaagctgaag
cgcaacctccccgtcgggaaatacgcaagcgacacggcctacctggacacgcacttccgg
ctgctgcgggaggatttcgtccggcccctgaggagcggaatctcggctcacttctccctg
cagaacgtgtttgggggcgctgggaagcagagggggctgcgggtctataggaacgtgcag
ctggcaaaggtgggcacctccccagtcggtgccatatacatggccaggttccaggccccg
cagggctcctcccacacctcctccaaacggctgctgagtggctccctgacctgcctcatc
tccagtgactgtggccaggtgttgtttgggactgtggtggggggcaacaggcctgagctc
ctgaagggggccgtgtggttggacattaaggcaaaccacagcgacctcctgatgaggcac
ctggggaaaaccaacttcatcatggtggagtcgccggccttcttcgagtcctacaggcac
gtgctggaggggctgcaggagctggaccccaccctggtgccattccagaactacatcgtg
cagtgccgcacccccgtcgccccacccacacacttcggaaaggacgtgacctttgacctc
tctgttctgcgccccactgggcgagccgacaaagagcccatgggggacacatctgagggg
cacgtgaccgcggtggacctgacagccgtgagactcggcgactcctatatctggtctcca
gagacatttcctcacttagacaagtctcaaatcttggccattcgaatggccctgaccagg
gaatttgtgctgatccagggccctccggggacaggcaaaaccttcattgggctccagatc
gtggagatcctgttgaggaatcagtctcagtggtggaaggaccagagacctttcctggtt
gtctgctacacaaaccacgctctggaccaatttatggaagggatcctgcagttccagccc
tccggcgtggtgcgcattggaggaaggagcagaagtgacaaggtggcagcttgctccttg
aggaaccttcgccaaaagcagctgccagcactcctgggggccgcggagaagcaccagtat
ggctggatgcggaaggccttgcagaagcagaaggagagcatcacctaccgcagtgcagtg
ctggagctcctccgccgaggaatcctcacggacacagagctggcagcggagatccacgat
gacaagctggagtgctcctggagagcggggcacttcgacatgtgcgactggctgaagatc
taccccgaggcgcaggaggagaagccatgccaggctcagggcaggggcaggaaggcaggt
gagtggctgggcaaagggccgggcgctgactccggctatgctcggagctcctcctgcaca
gcccaggcacacaggggcatagccctgctaagctcaggtgaccggatgagagtgggggca
ggggtcacacatgcctgtataagaaaaagccctgaatatcaggacatctggtcaccttgc
ccccttccaggcgcggaggaagagctctggccgtgcctcagggatgagcgggccctggat
gacgaggacgatttggacccttccgagtggcggcggagtacagtggaggagaagtttgct
tacatcctccccgctgagagcagctcctcacaccaagagatgcgcaaatgcttggaggag
ggtgacatcatgactgacgaggacgtcgcgaacgtgagagacgtcggggagctgcggctg
agggatcgctggcgtctctacaggaggtggatgctggcctatgagcgtcagctgaaggag
acgctggtggagaagctggaggagtatgagaagaaagcagcccagctaacggagctgacc
ttccaggaggacctgtgggtgctgaaacgcagccaggtcattggcatgacgacaacaggg
gctgctaagtaccgaaagctcttgcagaaaatccagccccacactgtgattgtggaagag
gcagcagagatcctggaagcgcacgttctaacctgcctcacgccagcctgcaagcacctc
atcctgattggagatcaccagcagctgcgacccaaacccgccgattacaccttggagaag
aagtatttcctcggcatctccctgttcgagcgcatgataaataatcagatcccctacgtg
cagctgctctatcagcaccgcatgcgccccgagatttcccagctgctggtcccgctcttc
tacaaacagctcaaagaccacgaggccgttgctgaatatgaacagatcaagggcgtggag
agcagcgtcttcttcatccagcacacagcggccgagagccacagcgctgactcagagagc
tacagcaacaggtttgaggcttcattcctggtctcgctgagcagatatctcctggagcag
ggatacaacgagagccaagtcaccattctgacaccctaccacggccaggtgctgaagatc
cgcatgctgctgaggagcagagacatgggagacgtggctgtccatgccgtggatgacttc
caaggggaggagaatgacatcattcttctctcgctagtacgaagcaacagagaagggagg
attggtttcctccaggataaaaatcggctctgtgtggctctctcaagggccagaaagggc
ttctattgcattggaaacctagccagcattgcagctgggtccaacagcaatctgtggaaa
gatattctacgtctcctaaagagaaagaaacttatgggggaagggctgacactggtgtgt
caaaatcaccccgataccaagacagtggtgaacgagagttcggacttcagtaaaatccct
gatggaggctgcatgctccagtgccaagcccggctggaatgcggccacccctgcacgcgc
cgctgccacccgtacgacagggatcacagcctatacctttgccagttcccatgctccaag
ctgtgtgagctcaaccacaggtgtccgagaaagtgcaaggaaccatgcgaaccttgttcc
gtggaagtggaaaaagtcattccaaagtgtgggcacctccagaccatcccctgtcacatg
ccagctgatcactggctctgccaagagccatgcaagcagcttctggaatgcaaacaccca
tgcacacgccgctgtggggaagcctgcagcacctgcaggtgcaaggaaatgattgacgtt
actctgccctgttctcacgtaatgagaactgaatgctacaagcagaaaatgcctctgagc
tgccttgagacatgcaaacagaaactcgagtgtggacaccactgcaaaggaaactgctat
gaatgtgtgcagggcaggttgcatgtccactgccgtaacaagtgcacaagggtccttctg
tgttcccaccagtgccaggaatcatgttttgagaactgtcctccatgcaagagaaaatgc
cccaacaagtgcaaacacagccactgcgataagccatgcggggagatctgttttccctgt
atacagccctgttcctggaaatgcaggcactaccggtgcacacaactgtgctccgagatg
tgcaatcgcccccgctgcaatgagccctgccaaaaatcactcaaatgcagccacccctgc
gcaggcctttgtggagagccatgtccgcccaagtgtcgcacgtgccacagagacgagctg
gcagagattttctttggggacgaagacgagccagaggcccgtttcattgtcctagaagac
tgcggacacgttttggaggtgcggggcctggatcgctggatggatggcgagccagacaac
gcccacgcccaacacgtccagctgaaggtgtgccccaaatgcgcgacacccatccagcac
aacacgcgttacaacaacgtgatcaaggccatacagcaaaaaatcaaggagatcaaattg
aagattcagggaaacaaggaagaacttgaagctggaaagcagcaactgctccttcggctg
aaccgtgacagagaccttgtggcctggacgggtatggaaagaagcattatgaacactgtc
tcccgtcagagccttctggacttggagaataccctaaatttccttgcaagtctctccaga
ctgaagcaacaagcgaagaagtgcacagtggcgagagaacgcaatttgaaaaggaagatt
gaggctgtggagcactggatcagcagaaacagatacgccttcacagctcagcagctcagg
gaatgcaggaatgagatcaagaggatatcgtacctgggaaacatctttgagcggctgagt
ggctacgaaaacaaacaagcatcgttacccaccgaggccatggcacttgctaacgaagcc
ataggcgtcctccagcggcaggaccgtttcacccagaatcaggaggaatctctccagagg
gtgctggagaagattgatgagttgcttcctgctgcagaactgcagctctccgaggcagaa
agggtcatgataacagaggccatgcaatttggcaaaggccactggtacaggtgccctcgg
ggccacttgtacacgattggggaatgcggccgcccaatgcagcagagcagctgccctgag
tgcggagctaccattggggggcaaaaccacgcgctcactcaggataacgtcgccgacgat
caaatactggaatccgctagtgcacaggagcaagaaccacgtctacaggacagtatctta
gctctgccccgctcccgcgatcagccatggtcactcacctgctgcccgcccagcccccac
cctcagctggactctccccctcctcgcccgcacagcccccaccctcagcccgactcgcca
cctccttgcctgcccagcccccaccctcagcccgactcgccgccccctccctcacccagc
ccccaccctcagcccgactcgccgccccctcgcctgcgcagcccccaccctcagcccgac
tcaccgccctctcgcctgcccagcccccaccctcagcccgactcgccgccctctcgcctg
cgcagcccccaccctcagcccgacttgctgccccctgcatcacccagcccccaccctcag
cccgacttgctgccccctgccccgcgcagcccccaccctcagcccgactcaccgccctct
cgcctgcccagcccccaccctcagcccgactcgccgccctctcgcctgcgcagcccccac
cctcagcccgacttgctgccccctgcatcacccagcccccaccctcagcccaactcacca
atccagccccctctgccagctggccttgccaaccccctgccctctgaacacatgactgtc
ctccaggctgagaaccagaacctgagagatcacgtatggcaactacagacagcaaacttc
tccctgcaggaacacattgcagctctcagagcagctgcaggtacccgcgtctcgccttgt
gacaccagctgggtaaccagcccgagttccgctcgcagagatgcagatggtgccatggtg
taa
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