Caldithrix abyssi: Cabys_1254
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Entry
Cabys_1254 CDS
T04549
Name
(GenBank) RND family efflux transporter, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
caby
Caldithrix abyssi
Pathway
caby01501
beta-Lactam resistance
caby01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cabys_1254
01503 Cationic antimicrobial peptide (CAMP) resistance
Cabys_1254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caby03036
]
Cabys_1254
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caby02000
]
Cabys_1254
01504 Antimicrobial resistance genes [BR:
caby01504
]
Cabys_1254
Chromosome and associated proteins [BR:
caby03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Cabys_1254
Transporters [BR:
caby02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Cabys_1254
Antimicrobial resistance genes [BR:
caby01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cabys_1254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
APF18003
UniProt:
H1XYY0
LinkDB
All DBs
Position
1473731..1474621
Genome browser
AA seq
296 aa
AA seq
DB search
MRSCIIAFLVLNMLVSCGKKEEKEQAQQPVAIKKNKIVKVVTKRVQKVSVTETKKAYGYA
VPFKSVDVFSKVNGVVLKKFRELGETVNAGDVLAVVRQDIPGMEFADHEVKANLSGTIFK
DFTEEGATVTVQKPLFNLARLDPILAEIKIPEEWLTRINFEQPINVNLEAFPTQTFQARL
YRLLPQNDSKSRSAIARLKISNPNLKIKPGMFVTAEFKFSRHDALVIPVDALVRSGLEYY
VFKVQNNVVHKQLVQPGELFGRNQEILNGLQANESVVVFGQNLLEDGVQVEVEEVQ
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcgttcatgcatcattgcctttcttgttttaaatatgcttgtatcctgcggcaaaaag
gaagaaaaagaacaggcccagcagccggttgcaatcaagaaaaacaaaatcgtaaaagtg
gtaaccaaacgcgttcaaaaagtaagtgtgacagaaacaaaaaaggcgtacggatatgcc
gtgccttttaaaagcgtggatgtcttctccaaagtgaacggcgtggttcttaaaaaattt
cgtgaacttggcgaaacggttaacgccggcgatgtattggctgtggtcaggcaggacatt
ccgggtatggagtttgccgaccatgaagttaaggccaatttgagcggcaccatttttaag
gattttacggaagaaggggcaaccgtaaccgtgcaaaagccgttattcaatctggcccgg
ctcgatcccatcctggccgagataaagattccggaagaatggctgacgcggattaatttt
gaacagccgataaacgtcaatctcgaagcgtttcccacgcagacctttcaggcgcggctt
tatcggctgcttccgcaaaatgattcgaaatccagaagcgccattgctcgcttaaaaatc
tcaaatccaaacttaaaaataaagccaggcatgtttgtaaccgcggagtttaaattttcc
cggcacgatgctttggttattcccgttgatgctctggtccgttccgggctggaatattac
gtttttaaagttcagaataatgttgttcataaacaactggtacaaccgggagaattattt
ggcagaaaccaggaaatattaaacgggctgcaggccaatgagtccgtggtggtgttcgga
caaaatttattggaagacggggtgcaagtagaggtagaggaagttcaatga
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