Caldithrix abyssi: Cabys_2029
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Entry
Cabys_2029 CDS
T04549
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
caby
Caldithrix abyssi
Pathway
caby00061
Fatty acid biosynthesis
caby00071
Fatty acid degradation
caby01100
Metabolic pathways
caby01212
Fatty acid metabolism
caby02024
Quorum sensing
Module
caby_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
caby00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cabys_2029
00071 Fatty acid degradation
Cabys_2029
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cabys_2029
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
caby01004
]
Cabys_2029
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caby04147
]
Cabys_2029
Enzymes [BR:
caby01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cabys_2029
Lipid biosynthesis proteins [BR:
caby01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
Cabys_2029
Exosome [BR:
caby04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cabys_2029
Exosomal proteins of breast cancer cells
Cabys_2029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
CSN1_C
ASL_C
Motif
Other DBs
NCBI-ProteinID:
APF18778
UniProt:
H1XUD0
LinkDB
All DBs
Position
complement(2426298..2428145)
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AA seq
615 aa
AA seq
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MQKMHLTTMILNQTQKHLDRAALFHKENHSWKSITWREMGKQITSVSSALLNWGVLPQER
IGIYSQNRPEWTISDYGIMGVRGITTTIYATSSEIDLEYIINDAQIEILFIGGQEQYDKA
IKILSENKTLKKMIVFDRSTKIQTDEKVIYFDDFIAQGLANYNAQALKQRLSEASPEDIA
TIIYTSGTTGRPKGVMLTQRNFFSQFKALDPLFNFSENDIELCFLPLSHAYQKSSTHWTQ
SHGVTVYYCENPKEVLDCFKEVRPTFMVGVPRLYEKMYAKVFATLENASGFKRGLFEWAL
EVGKEYQYKAFKKENISPYLRLKHTLARKLVLNKIRNIMGGRLNFFSAGGAPLSSEIEEF
FFAAGIFIAQGYGLTETSPVVSCNRPDQFKFGTPGKVVNICQVKIAPDGEILVKGENVMK
GYYRKPELTAEVLSPDGWFRTGDIGYLDSDGFLHITDRKKDIIITAGGKNIAPQPIESHI
GKDYYIEQIALIGDKRKYITALIVPSFEALEEFAQKHDIKYDTLSELVKNEKVIQFYRQR
LDELSKPLSAYERIKKFTLLSQPFSVEKGEITPTLKLKRKVIEKNYRDEIERMYSVDNGQ
AEDHQPQLLRQSAAL
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagatgcatttaacaacaatgattttaaatcaaacgcaaaaacatctcgatcgg
gccgcgttatttcacaaagagaatcattcatggaaaagtattacctggcgcgaaatgggc
aaacaaatcaccagcgtctccagtgcgttattaaactggggcgtgcttccccaggaacgc
atcgggatttactctcaaaacagaccagagtggactataagcgattacggaataatgggc
gtaaggggcattacgaccacgatttacgccaccagttccgaaattgatttagaatacatt
attaacgatgcgcaaatcgaaattctttttattggcggccaggaacaatacgataaagca
ataaaaattctttctgaaaacaaaacattaaagaagatgattgtattcgaccggtcaaca
aaaattcaaaccgacgaaaaggtcatctattttgatgattttattgctcagggattggct
aattacaacgctcaggccttaaaacaacgcctgagcgaggcatcgccagaagacatcgcc
accatcatctacacttccgggaccaccggacgccccaaaggcgtaatgttaactcaacgt
aattttttcagccagtttaaagcgcttgacccgttatttaatttcagtgaaaacgatatc
gaactctgttttcttccgcttagccatgcctaccagaagtcgtccacacactggacgcaa
tcgcatggcgtaactgtttattattgcgaaaatcccaaggaagttcttgattgtttcaag
gaagttcgaccaacttttatggtcggcgttccccgcttatatgaaaaaatgtacgccaaa
gtttttgccactctggaaaacgcctccggctttaagagggggctgtttgaatgggccctg
gaagtcggaaaggaatatcagtataaagcctttaaaaaagaaaatatttcaccttatttg
cgcctaaaacatacactggcccgaaaattagttttaaataagattcgtaatatcatgggc
ggaagattgaacttcttttcggcaggaggcgctccgttgtcttcagaaattgaagagttc
ttttttgccgccggtatttttattgctcagggctacggtttaacggagacctcgccggtc
gtttcatgcaatcggccagatcagtttaaatttggcacgccgggcaaggtggtgaatatc
tgtcaggtaaaaatcgccccagatggcgagatattggtcaaaggcgaaaatgtaatgaaa
ggttattatcgcaaaccagaattaacggccgaagtcctttcgccagatggatggtttagg
acgggcgacatcggttatctggacagcgatggatttttacatattacagaccgcaagaaa
gatattatcatcaccgcaggaggcaaaaacattgcgccgcaaccgattgaatcgcatatt
ggcaaggactattacatcgaacaaattgcattaatcggcgataagcgaaaatacatcacc
gctttaatcgttccctcttttgaagcgttagaagaattcgctcaaaagcatgacattaaa
tacgatacattgtcagaattagtaaaaaacgaaaaagtgattcaattttatcgacagcgc
ttagatgaactttcaaagcccctgtctgcctatgagaggattaaaaagtttactcttttg
tcccaacccttttctgtagaaaaaggagagataacgccaacgcttaagctaaagagaaaa
gtaattgaaaagaactacagagacgaaatcgaaaggatgtattccgtggataatggacag
gccgaagaccatcagccacaactgctgcggcaatctgcggcgctatag
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