Clostridium acetobutylicum ATCC 824: CA_C2854
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Entry
CA_C2854 CDS
T00056
Symbol
recD
Name
(RefSeq) ATP-dependent exoDNAse subunit alpha RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cac
Clostridium acetobutylicum ATCC 824
Pathway
cac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CA_C2854 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cac03400
]
CA_C2854 (recD)
Enzymes [BR:
cac01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CA_C2854 (recD)
DNA repair and recombination proteins [BR:
cac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CA_C2854 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_4
AAA_19
AAA_30
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PhoH
PIF1
AAA_23
SLFN-g3_helicase
AAA_22
nSTAND3
UvrD_C
UvrD-helicase
DNA_pol_lambd_f
AAA
HHH_2
AAA_28
DEAD
SMC_N
HerA_C
DUF575
AAA_16
ABC_tran
AAA_29
NTPase_1
Motif
Other DBs
NCBI-GeneID:
1119037
NCBI-ProteinID:
NP_349457
UniProt:
Q97F87
LinkDB
All DBs
Position
complement(2987112..2989331)
Genome browser
AA seq
739 aa
AA seq
DB search
MVELRCVIEAVVFKNEENGYVVANANAEGKDKITIVGCIPYIMEGQSLKISGEWIVHPQF
GKQFKIERCEEILPNSLLGIEKYLASGIISGIGPVTAKKIVNKFGEKTLEILDNDIYRLS
EIEGIGKKKIDKIYEAYSEQREVRNIMIFLQNYGVTPKQCVKIYNHYKSKAIEVVKQNPY
ILVEEISGIGFKTADKIARSLGIQGNSPFRIESGVCYVINEFCALGNTYMPIDKLVKNCI
NVLNVKKEEVEKAIYECTLSQKIKVEIINGENCVFTMEYYYCEIGITRKIITLAYDSYKS
LEIDVDQKIIQFENENKIKFAPSQVEAIEGAFSNGIEVITGGPGTGKTTIIRCITYIFEE
LNMKVFMAAPTGRAAKRMSESTGREAKTIHRMLELGYEDEVFFDNNNYSTLQCDVVIIDE
ASMIDVVLMNSLLKSIGMGTRVIIVGDVDQLPSVGPGNVLRDIIESKCVKVIRLNNIFRQ
AKESMITVNAHKINSGEMPLLNKKDKDFYFIREDNAEAITNTIISLVYKRLPLFNKSWKA
ARDIQVLAPMKKGIAGVANLNVSLQSIINPPHKSKDEIKFRDNIFRVGDKVMQIKNNYML
KWNRINGDGEKTGEGVFNGDIGFISNIDEDNNVIVIFDDEKEVTYERINLDELELAYAIT
IHKSQGSEFPVVVLPMTMGPPLLMNRNLLYTGITRAKQLVVIVGFPKAIKFMIDNDKSFE
RYSGLKWRIEDIIKEESEE
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtagaacttcgttgtgttattgaagctgttgtgttcaaaaatgaagaaaatgggtat
gttgttgcaaacgcaaatgcagaaggaaaagataaaattacaattgttggatgcataccg
tatattatggaaggccaatctttaaagatttcaggagaatggattgttcatccacagttt
ggaaagcaatttaaaattgaacgctgcgaagaaatactacctaattctttattaggtata
gaaaaatatttggcatcaggaattatatcgggaataggtcctgtaacagcaaaaaagata
gttaataaatttggagaaaaaactcttgagatattagataatgatatatatagattaagt
gaaatagagggaataggtaaaaagaaaatagataaaatatatgaggcgtattcagaacaa
agagaagtaagaaatattatgatttttcttcagaattatggcgttacgcctaaacaatgt
gtgaaaatatataatcactataaatctaaggctatagaggttgtgaaacaaaacccatat
attcttgtagaagagatatcaggaataggttttaagacggcagataaaatagctcgtagt
cttggaatacaaggaaactctccatttagaattgaaagtggagtatgttatgtaataaat
gaattttgtgctttaggtaatacatatatgcctatagataaacttgtaaagaactgtatt
aatgtattaaatgtaaaaaaagaagaggttgaaaaagcaatatatgaatgtactctttct
caaaagataaaggttgaaataataaatggggaaaattgtgtttttacaatggaatattac
tattgtgagataggaataacaagaaagataataactcttgcctatgatagttataaaagc
ttagagatagatgtagaccaaaagataatacagtttgaaaatgaaaataaaataaaattt
gcaccatcacaagtagaagctattgaaggagcgttttcaaatggtatagaagtaataaca
ggagggcctggtacaggtaagacaacaataataagatgcataacatatatatttgaagaa
ttaaatatgaaggtatttatggcagcacctacaggaagagctgcaaaaagaatgtccgaa
tcaacaggtagggaggccaagaccatacatagaatgctggagcttggatatgaagatgag
gtgttttttgataataataactatagtacacttcaatgtgatgttgtaataatagacgag
gcatcaatgatagatgttgttttaatgaacagtctattgaagtcaataggtatgggtact
agggttattatagttggtgatgtagaccagcttccttctgtgggacctggaaatgtgctg
agagatataattgaaagtaaatgtgtaaaggtcattagattgaataatatttttaggcaa
gcaaaggaaagtatgattacagtgaatgcgcataaaatcaatagtggtgaaatgcccctt
ctaaataaaaaggataaggatttttattttatacgagaagataatgcagaagctataacc
aatactataattagtttggtttacaagagactgccactttttaataagtcttggaaggct
gctagggatatacaagtgttagcacctatgaaaaaggggatagcaggtgttgcaaactta
aatgtaagtcttcaaagcattattaatcctcctcataaaagtaaagatgaaataaaattt
agagataatatatttagagttggcgacaaggttatgcaaataaaaaacaattatatgtta
aaatggaatagaataaatggagatggcgaaaagacaggagaaggagtttttaatggagat
atagggtttataagtaatatagatgaggataataatgtgatagttatttttgatgatgaa
aaagaggttacatatgaaagaattaacttagatgaacttgaacttgcatatgcaataact
atccataaaagccagggaagtgaattcccagtagtggttcttcctatgactatggggcca
cctcttctgatgaataggaaccttctttatacaggaattacaagagcaaagcagctagtt
gtaatagttgggtttccaaaagcaataaaatttatgatagataacgataaaagttttgaa
agatattcaggtctcaaatggagaatcgaagatataataaaagaagagagtgaggagtga
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