Caenibius sp. WL: K5X80_16730
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Entry
K5X80_16730 CDS
T08345
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
caen
Caenibius sp. WL
Pathway
caen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
caen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K5X80_16730 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caen03400
]
K5X80_16730 (mutM)
Enzymes [BR:
caen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
K5X80_16730 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
K5X80_16730 (mutM)
DNA repair and recombination proteins [BR:
caen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K5X80_16730 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QZP08250
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All DBs
Position
3451616..3452428
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AA seq
270 aa
AA seq
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MPELPEVETTVRGLAHVLQGQRLTRVAAHRADLRRPFPPDLVQALTGAHVSSLGRRAKYG
LIHIDRGQTLVFHLGMSGRWRIDPARPDKHDHFVLETESGHVLALNDPRRFGSLDLVPTD
SLAQWPQFAAMGPEPLGEDLTARHLKAAFAGRRQAIKLLLLDQRIVAGLGNIYVCEALFR
AGISPERAGGSVSLPALGRLVPAIRQVLEESIADGGSTLRDFARPDGELGYFATRFHVYG
REGEPCRCGGTVRRIVQGGRSTWYCPRCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtcgaaaccactgtcaggggcctcgcccacgtgctccagggc
cagcgcctcacccgcgtggccgcccaccgcgccgacctgcgccgcccgttcccgcccgat
ctcgtccaggctttgaccggggcgcatgtctcgtcgctgggccgccgggcgaaatacgga
ttgatccacatcgatcgcgggcagacgctggtgtttcacctggggatgagcgggcgctgg
cggatcgatccggcccggcccgacaagcacgaccatttcgtgctcgaaaccgaatcgggc
catgtgctggcgctcaacgatccgcgccgtttcggctcgctcgatctcgtgcccaccgat
tcgctggcgcaatggccgcaattcgccgcgatggggcccgaaccgctgggcgaggatctg
accgcccgtcatctcaaggccgctttcgccgggcgcaggcaggcgatcaagttgctgctg
ctcgatcagcggatcgtcgccgggctcggcaatatctatgtctgcgaagccttgttccgc
gccgggatcagcccggaacgggccggcggcagcgtctctctccccgcgctcgggcggctg
gtccccgccatccggcaggtgctcgaagaatcgattgccgatggcggatcgactttgcgc
gattttgcccggcccgatggcgaactcggttatttcgccacccgcttccatgtctatggc
cgcgaaggcgaaccgtgccgctgcggcggaaccgtccgccggatcgtgcagggcgggcgc
agcacgtggtattgcccgcgatgccagaagtga
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