Citrobacter amalonaticus FDAARGOS_165: AL524_16370
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Entry
AL524_16370 CDS
T04738
Name
(GenBank) excinuclease Cho
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
caf
Citrobacter amalonaticus FDAARGOS_165
Brite
KEGG Orthology (KO) [BR:
caf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
caf03400
]
AL524_16370
DNA repair and recombination proteins [BR:
caf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL524_16370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AMG56050
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All DBs
Position
3396060..3396974
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AA seq
304 aa
AA seq
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MHNQHPEFTVARRQSVPRLEFEAAAVYEYPEHLRPFLESLPSVPGVYLFHSESDTLPLYI
GKSVNIRSRVLSHLRTPEEAAMLRQSRRISWIGTAGEIGALLLEARLIKEQQPLFNKRLR
RNRQLCALTLRDGKVDVVYSRDVDFSHAPDLFGLFANRRAALAALQSLADEQRLCYGRLG
LEPLSRGRACFRAALKRCAGVCCNKESPQEHDARLQASLEKLRVICWPWKNAIALRESRA
QMTQYHVINNWLWLGAVDTLEDAATLVQTPAGFDHDGYKILCKPLVAGTCEIIELNPGNT
PATR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcataaccagcatccggagtttaccgtggcacggcgtcaatcagttcctcgtcttgag
tttgaagcagcagcagtttacgaatatcctgaacatctgcgccctttcctggagtcgctc
ccgagcgtgcctggtgtttacctgtttcacagcgaaagcgacaccctgccactttacatt
ggtaaaagtgtcaatatccgcagtcgggtactgtcgcatttacgcacgccagaagaagcc
gccatgctgcgccagtccaggcgtatctcctggatcggtaccgccggtgaaatcggcgcg
ctattactcgaggcacggctgattaaagagcaacagccgctatttaataaacgcctgcgc
cgcaaccgccaactctgcgcattaacgctccgggatggaaaagtggatgtcgtctattcg
cgtgacgttgatttctcccacgctccggatctgttcggtctttttgccaaccgccgcgca
gcgcttgccgccttacagtcactcgctgacgaacaaagattgtgttacgggcgactgggt
cttgaacccctgagccgtggccgagcctgctttcgcgccgcgctaaaacgctgcgctggc
gtctgctgtaataaagaatcgccacaggagcacgacgcccgtttacaggcatcgctggaa
aaactgcgcgttatctgctggccgtggaaaaacgccattgcgctcagagagagtcgtgcg
caaatgacgcagtatcacgtcattaataactggctatggctgggggcggtcgatacgctg
gaggatgcggcgacgctggtccagacgccagccggttttgatcatgacggttacaagatt
ctctgtaagccgctcgttgccggaacctgtgaaatcattgaactgaatccggggaatacc
cctgcaaccaggtga
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