Candida albicans: CAALFM_C300830CA
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Entry
CAALFM_C300830CA CDS
T00189
Symbol
CaO19.6155
Name
(RefSeq) DNA ligase (ATP)
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
cal
Candida albicans
Pathway
cal03030
DNA replication
cal03410
Base excision repair
cal03420
Nucleotide excision repair
cal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CAALFM_C300830CA (CaO19.6155)
03410 Base excision repair
CAALFM_C300830CA (CaO19.6155)
03420 Nucleotide excision repair
CAALFM_C300830CA (CaO19.6155)
03430 Mismatch repair
CAALFM_C300830CA (CaO19.6155)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cal03032
]
CAALFM_C300830CA (CaO19.6155)
03400 DNA repair and recombination proteins [BR:
cal03400
]
CAALFM_C300830CA (CaO19.6155)
Enzymes [BR:
cal01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CAALFM_C300830CA (CaO19.6155)
6.5.1.6 DNA ligase (ATP or NAD+)
CAALFM_C300830CA (CaO19.6155)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
CAALFM_C300830CA (CaO19.6155)
DNA replication proteins [BR:
cal03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
CAALFM_C300830CA (CaO19.6155)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
CAALFM_C300830CA (CaO19.6155)
DNA repair and recombination proteins [BR:
cal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
CAALFM_C300830CA (CaO19.6155)
NER (nucleotide excision repair)
Other NER factors
CAALFM_C300830CA (CaO19.6155)
MMR (mismatch excision repair)
Other MMR factors
CAALFM_C300830CA (CaO19.6155)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
Motif
Other DBs
NCBI-GeneID:
3647757
NCBI-ProteinID:
XP_710637
UniProt:
A0A1D8PJ08
LinkDB
All DBs
Position
3:complement(165325..167637)
Genome browser
AA seq
770 aa
AA seq
DB search
MFSRLVSYRYPIGVQLKQANRIMSNKKQQSLARFFGGITPPSGSNSTSPEKQQSLTRFFG
SSSNNSSPKKATTEAKQKREATPPKSPPRSKKARIETKSDESSSSSSSNGDIEMETEPKL
EKNNGSGNDVRNEAEELIKLSESEQAKHSNEKLGVKIPYAKLASVFEAIENESSRLAIIA
IISQFFLEVLQQSTIDKLIRIVYLCINRLGPDYEPGLELGLGETILIKAISECYGRETSK
IKADYKSTGDLGLIAQKSRSLQPTMFKTAPLDVDTVFDNSLKIAKSTGKESQSKKISIIK
QMLTACQMKSSEAKFLIRSLQGKLRIGSAEKSIIVGLAQAFVNYENKSNKKIDPSKLAEA
EEIMKEAFSRVPNYEVVLKTAYQYGIFNLLEHCFVTPGIPLKPMLANPTKSIGEVLDRFQ
NEEFTCEYKYDGVRAQVHILSDGSIKVFSRNLEDMTQTYPDLISIGKQFAVSGNTISMIL
DCEAVAWDREDHKILPFQKLTTRKRKDVNEEDIKVQICLFAFDLLYYDNESLLPKSLAER
RKIMQENLSPIEDRFQFATATNSSSNLEVLQQFLDQSIKDSCEGLMVKMLNGSESFYEPS
KRSRNWLKLKKDYLEGVGDSLDLVVIGAYNGKGKRTGTYGGFLLASYNEDSGDLETCCKI
GTGFSDEDLLNLYNKLHPTEIASPKNYFVYDTNNSNAVPDVWFEPSMLFEVLTADLSLSP
IYKTGHQEFGKGVSLRFPRFIRVRDDKGIEDATSSDRVCEFYQRQAHVNN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtagacttgtatcttatcgatatccaattggtgtccaattaaaacaagcaaat
aggatcatgtcaaataagaaacaacaatcattagctcggttttttggaggtatcacacct
ccctcaggttcaaattcaacatctcctgaaaaacaacaatcattgacaagattttttgga
agttcctcaaacaatagtagtccgaaaaaggcaaccactgaagctaaacagaaaagagaa
gctacaccacctaaatcgccaccccgttccaagaaagctagaattgaaacaaagtctgat
gagagtagtagtagtagtagtagtaatggtgatatcgagatggaaacagaacccaaattg
gaaaaaaataatgggtctggcaatgatgttcgtaatgaagctgaagaattgatcaaactc
agcgaatcagaacaagctaaacacagtaatgaaaaattgggtgtcaaaattccctatgcc
aaattagcatctgtgtttgaagcaattgaaaatgaaagttctcgattagcaattattgcc
attatatcacaattttttttggaagttttacaacaactgacaattgataaacttattcgt
attgtctatttatgcataaatagacttggtcctgattatgaacccgggttggaattaggg
ttaggtgaaaccattttaattaaagctattagtgaatgttatggaagagaaacatcgaaa
atcaaagctgattataaatctacaggagatttaggtttaattgcccaaaaatcaagaagt
ttacaaccaacaatgttcaagactgccccacttgacgttgatactgtttttgataattca
ttgaaaattgccaaatcaactgggaaagaatctcaatcgaagaaaatcagtatcatcaaa
caaatgttaactgcatgtcaaatgaaaagtagcgaagccaagtttttaattcgttcatta
caagggaaattaagaattggactggctgaaaaaagtattattgtgggattagctcaagca
tttgttaattatgaaaataaatctaataaaaaaattgatccatctaaattagctgaagct
gaagaaattatgaaggaagcattttcacgtgttcctaattatgaagtggtgttgaaaact
gcttatcaatacggtatcttcaatcttttggaacattgttttgttaccccagggataccg
ttgaaaccaatgttggcaaaccctacaaagtctatcggagaagtattggatcgtttccaa
aatgaagaattcacttgtgaatataaatacgatggtgttagagctcaagttcatatattg
tctgatggatccatcaaagtattttcaagaaatttggaagatatgacacaaacttatcct
gatttgatttctattggtaagcaatttgccgttagtggtaatactatttccatgatttta
gattgtgaagcagtagcttgggatagagaagatcataagattttaccatttcagaaatta
actactagaaaaaggaaagatgtcaatgaagaagatatcaaagtgcaaatttgtttattt
gcctttgatttattgtattacgataatgaatcacttttacccaaatcattagctgaaaga
aggaaaatcatgcaggagaatttatctccaattgaagatagatttcaatttgcaactgcc
acgaattcatcttccaatttggaagtgctacaacagtttttggatcaatcaattaaggat
tcatgtgaagggttgatggtaaagatgttaaatggactggaatcgttttatgaaccatcg
aaacgttcaagaaattggttgaaattgaaaaaagattatcttgaaggagttggtgattcg
ttagatttggtagttattggagcttataatgggaaaggtaaaagaacgggaacttatggt
gggtttttattagcttcatataatgaagattcaggggatcttgaaacttgttgtaaaata
ggtacaggttttagtgatgaagatttactcaatttatacaacaaattgcatccaacagaa
attgcatcaccgaaaaattattttgtttatgacaccaataattcaaatgctgttcctgat
gtttggtttgagcctagcatgttgtttgaagttttaacggcagatttatctttaagtcct
atttataaaacaggtcatcaagaatttggaaaaggtgtatcattaagattccctagattt
atacgagtaagagatgataaaggtattgaagatgctactagttctgatcgtgtttgtgaa
ttttaccaacgtcaagcccatgtaaacaattga
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