Caloramator sp. E03: FDN13_12535
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Entry
FDN13_12535 CDS
T05994
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cale
Caloramator sp. E03
Pathway
cale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDN13_12535 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cale03400
]
FDN13_12535 (uvrA)
DNA repair and recombination proteins [BR:
cale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDN13_12535 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDN13_12535 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
AAA_16
AAA_15
AAA_33
nSTAND1
ATPase
AAA_22
APS_kinase
nSTAND3
AAA_21
DnaJ_CXXCXGXG
AAA_18
Viral_helicase1
cobW
NACHT
AAA_23
DUF4350
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QCX34460
UniProt:
A0A5B7TLX8
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Position
2639369..2642194
Genome browser
AA seq
941 aa
AA seq
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MSLDKIIIKGAREHNLKNIDLEIPRNKLIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDYIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLYARIGVP
HCPKCGREIKQQSLDQIVDKVMEFGEKTKIQVLSPVVRGRKGEHTKLLENIKKNGFVRVR
IDGEILDINEDIKLEKNIKHNIEVVVDRIVIKEGIEARLSDSIETALKLSEGLVIIDIVG
EEEILFSENFACPECGISIGELAPRMFSFNNPYGKCPVCDGLGSLMELSPDLIIPDKKKS
INEGALKPYNGFKEDSWGYSIISGLAKHYNFSLDEPVENLPEDIINILLYGNNGEKFKIE
YNTEFRRGEILHTFEGIIPNLERRYKETNSDYIRSEIENYMTVRKCPKCNGARLREESLA
VTVAGLPINKVCDMAVRDSLEFFKNLKLTDREYTISKQIIKEIKARLQFMVDVGLDYLTL
SRAASTLSGGESQRIRLATQIGSSLVGVLYILDEPSIGLHQKDNDKLISTLKHMRDLGNT
VIVVEHDEDTIREADYVVDIGPGAGSHGGKIVAHGTPEEIAACEDSITGQYLSGRKKIEI
PSKRRVPNGNWINIKGARENNLKNIDVNIPLGVMTVVTGVSGSGKSTLVNEILYKGIAKK
VMGTKAYPGEHDDILGIENIDKIIDIDQSPIGRTPRSNPATYTGVFDYIREIFAQTPEAK
MRGYKTGRFSFNVKGGRCEACSGDGIIKIEMQFLPDVYIPCEVCKGKRYNRETLEIKYKG
KNISDVLDMTVEEALEFFENIPRIKNKLQTLYDVGLSYIKLGQPSTQLSGGEAQRVKLAT
ELSKRSTGKTLYILDEPTTGLHIEDVRRLIDILQRLVESGNTVVVIEHNLDVIKCADYII
DLGPDGGDRGGKIVVSGTPEEVANCKESYTGLYLKKILKQI
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagataaaataattataaaaggagcgagagagcataatctaaaaaatatagat
cttgaaatacctcgaaataagctaattgtatttacaggcctttcgggctctggtaaatca
tcccttgcatttgacactatatatgcagaaggtcaaagaaggtatgttgagtctctttca
gcttatgcgaggcagtttttgggccaaatggataaaccagatgttgattatatagaaggg
ttgtcacctgcaatttcaatagatcaaaaaactacaagtaaaaatccccgttcaactgta
gggacggtaacggaaatttatgattacttaaggcttctttatgcaaggataggagtgcca
cactgccctaaatgtggccgtgagataaagcagcaaagccttgatcagatagttgataag
gttatggagtttggagaaaaaacaaaaatacaagttttatctccagttgttcgtggaaga
aaaggagaacatacaaagcttcttgaaaatattaagaagaatggattcgtaagagtaaga
atagatggtgaaatattagatataaatgaagacattaaacttgaaaaaaacataaagcac
aatatagaagttgttgttgatagaatagttattaaagaaggaatagaagcaaggctttct
gattcaatagaaacagcattaaagctatcagaggggcttgtaataatcgatatagtagga
gaagaagagatactttttagtgaaaactttgcttgcccagaatgtggaataagcatagga
gaacttgcaccaaggatgttctcttttaataacccttatggcaaatgtccagtatgtgat
ggattaggatctcttatggagctttctccagaccttataatacctgacaagaaaaaatct
ataaacgaaggagctttaaagccttataatggctttaaggaagattcatggggatactct
ataatatctggtcttgcaaaacattataattttagccttgatgaacctgttgaaaatttg
cctgaggatattattaacatactgctatatggaaataatggtgagaaatttaaaatagaa
tataatactgagtttagaagaggggagatacttcatacctttgagggaatcataccaaat
ctggagagaagatataaggaaacaaattcagattatattagaagcgaaattgaaaattac
atgacggttagaaagtgtcctaaatgtaatggtgcaagattaagagaagaaagccttgca
gttactgttgcagggcttcctattaacaaggtatgtgatatggctgtaagagatagcctt
gaatttttcaaaaaccttaaacttacagatagggagtatactatttccaaacagataatt
aaggagattaaagcaagacttcagtttatggttgatgttgggcttgattatcttactctt
tcaagggctgcttcaactttatcaggaggagaatcccaaaggattaggcttgcaacccag
ataggatcaagtcttgttggagttttatatatacttgatgaaccaagcatagggcttcat
caaaaagacaatgataagctaatatcaaccctaaagcatatgagagatcttgggaataca
gttatagttgttgaacatgatgaggatacaataagagaagcagactacgttgtagatatt
ggccctggagcaggttcccatggcggtaaaatagttgcccatggaacaccagaggaaatt
gcagcctgtgaagattctattactggtcaatacctatcaggaaggaagaaaattgagata
ccctctaaaagaagagtacctaacggcaattggataaatataaaaggtgcaagggaaaac
aatctaaaaaatatagatgttaatattccccttggggttatgacagttgtaactggagtt
tctggttctggaaaaagtacattagtaaatgaaatactatataaagggattgctaaaaaa
gttatgggaacaaaggcttatccaggtgagcatgatgatatacttggaattgaaaacata
gataagataatcgatattgatcaatctccaattggtagaacccctcgctcaaatcctgca
acctatacgggagtttttgactatataagagaaatatttgctcaaactcctgaagcaaag
atgagaggatataagacagggcgttttagctttaatgttaaaggaggaagatgtgaagcc
tgcagtggagatggaattattaaaatagaaatgcagtttttaccagatgtttatataccc
tgtgaagtatgcaaaggaaaaaggtacaacagagaaactcttgagattaaatataaagga
aaaaatatttcagatgtacttgatatgactgtagaagaagcccttgaattttttgaaaac
ataccaaggattaaaaataaacttcaaacgctatatgacgtagggctatcatatataaag
cttggtcaaccctcaactcagctatcagggggagaggcacagagagtaaagcttgcaact
gaactttcaaaaaggagtactggtaaaacactatatatacttgatgagcctacaacaggc
cttcatattgaagatgttagaaggcttattgatatacttcaaaggcttgttgagagtgga
aatacagtagttgtaattgagcataatttagatgttattaaatgtgcagattatataata
gacttaggtccagatgggggagatagaggagggaaaattgtagtatcaggaacgcctgaa
gaagtagcaaattgtaaggaatcatatacagggctatatttaaaaaagatactgaagcag
atataa
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