Calothrix sp. NIES-2098: NIES2098_25970
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Entry
NIES2098_25970 CDS
T08374
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
caln
Calothrix sp. NIES-2098
Pathway
caln00300
Lysine biosynthesis
caln00550
Peptidoglycan biosynthesis
caln01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NIES2098_25970
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NIES2098_25970
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
caln01011
]
NIES2098_25970
Enzymes [BR:
caln01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
NIES2098_25970
Peptidoglycan biosynthesis and degradation proteins [BR:
caln01011
]
Precursor biosynthesis
Amino acid ligase
NIES2098_25970
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
BAY09435
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Position
complement(3106938..3108440)
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AA seq
500 aa
AA seq
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MKLRELLAAIDSVEQLPKHPALADAEVQGLKTNSHACGVGDLFIGMPGTRVDGGEFWQSA
IASGAVAAVVSPQAVQKNPPTSEAVVISASDMTKACAQLAGAFYGYPGRKLKLVGVTGTN
GKTTTTHLIEFLLGKANQPTALMGTLYTRWPGFAETAVHTTPFAVELQQQLAQAVDAGCE
YGVMEVSSHALAQGRVLGCEFEVAVFSNLTQDHLDFHRDMEDYFAAKALLFSPDYLKGRA
IINADDPYGKRLIGALSPEKVWSYSVNNANADFWMSDLNYEPNGVSGTLHTPKGNVAFRS
PLVGQYNLENLLAAVGAVLHLGLDLQLVAAAISEFPGVPGRMERVQVIPNQDISVIVDYA
HTPDSLENLLKAARPFIPGKMICVFGCGGDRDRTKRPKMGKIAAELADVAVVTSDNPRTE
DPQKILQDILAGIPETIHPTVIGDRAAAIRTAILQAQPGDGVLLAGKGHEDYQILGTEKI
HFDDREHARAALQERLKIQN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgggaattactagcagcgatagacagtgtagagcaattacctaagcatcct
gcgttggcggatgcagaagtgcagggcttgaaaaccaattcccatgcgtgtggtgtggga
gatttgtttattgggatgccaggaacaagggtagatgggggagaattttggcaaagtgcg
atcgcatcgggtgcggtagcagcagttgtatctccccaagctgtgcagaaaaatcctccc
actagcgaggctgttgtcattagcgctagcgatatgactaaagcctgcgcccaattagca
ggtgctttttacggttatcccggacgaaaactcaaactagtgggtgttaccggaactaac
ggtaaaaccacaactacacacttgattgaatttctgttggggaaagcaaatcaacccaca
gctttgatggggactctttatacgcgctggccgggttttgccgaaacggctgtccacact
acaccgttcgcggtggaactgcaacagcagctagcacaagctgtagatgctggttgtgag
tatggggtgatggaagttagttcccatgctttggctcaaggtcgcgtgttgggttgtgag
tttgaggtggcggtgtttagcaatctcacccaagaccacctagactttcaccgcgatatg
gaagattattttgcggcaaaagcattattgtttagtccagattatctcaaaggacgggca
ataattaatgctgatgacccttatggtaagcgattaattggcgcgttgagtccagaaaaa
gtttggagttacagcgttaacaatgccaatgctgacttttggatgagcgatctcaattac
gagcctaacggtgtgagtgggacattacatacacctaaggggaatgtagcttttcgttcg
cctttagttggtcaatacaatttagaaaatctgttagcagcagttggtgcagttttacac
ttgggtttagatttacagttagttgcagctgcaatctctgaatttcctggggttcccgga
cggatggaacgagtacaggtaattcccaatcaagacatcagcgtgattgtggattatgcc
cacacaccagacagtttggagaatctcctgaaagcggctcgtccgtttattcctgggaag
atgatttgtgtgtttggttgtggtggcgatcgcgatcgcactaaacgcccgaaaatgggg
aaaatagctgccgaattagctgatgtagccgtggtgacttcagataatccccgtacagaa
gacccacaaaagattttacaagatattttggccggaattcctgaaacgattcatcccaca
gtgattggcgatcgcgctgctgcaattcgcactgcaattttacaagcacaaccaggcgat
ggagtgttacttgctggtaaaggtcatgaagattaccaaattctcggtacagaaaaaatc
cactttgacgatcgagaacacgcacgcgcagctttacaagaaagactaaaaattcaaaat
taa
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