Cicer arietinum (chickpea): 101491925
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Entry
101491925 CDS
T02819
Name
(RefSeq) exosome complex component RRP42-like
KO
K12589
exosome complex component RRP42
Organism
cam
Cicer arietinum (chickpea)
Pathway
cam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101491925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cam03019
]
101491925
Messenger RNA biogenesis [BR:
cam03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
101491925
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
101491925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
CoA_trans
Motif
Other DBs
NCBI-GeneID:
101491925
NCBI-ProteinID:
XP_004509272
UniProt:
A0A1S2YSM4
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Position
Ca7:complement(13881706..13886641)
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AA seq
286 aa
AA seq
DB search
MVGLSLGEQFFIQGGIAQDLRCDGRKRLSYRPIYVQTGVIPQANGSAKVRIGDTEVIASV
KAELGKPSLMQPDKGKVSIHIDCSSTAEPAFEGRGADWLSADLSNALQRCLLGAKSGAGA
GIDCSSLVVVQGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPKVQIAAGASSD
EKPEVEVSDEEFLQFDTSGVPVIVTLTKVGKHYIVDATSEEESQMSSAVSISINRQGYIC
GVTKRGGMGLDPSVILDMVSVAKLVSEQLINKLDSEIASAEAEDES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggttggtttatctctaggagaacaatttttcatacaaggtggcattgctcaagatctt
cgctgtgatggtagaaaaagattgagttatcgacctatctatgttcaaactggagtcatt
cctcaggcaaatggttcagcaaaagtcagaattggtgacacagaagtcattgccagtgtg
aaggctgaacttggaaaaccaagcttaatgcaacctgataaagggaaagtctccatacat
attgattgtagttccactgcagagccagcttttgagggtagaggggctgattggttgtca
gcagacctgtcaaatgctcttcaacgctgtctcttgggtgctaaaagtggagcaggtgct
ggaattgattgctcctcacttgttgttgtccaagggaaaatttgttgggatctttatatt
gatgggcttgttgttagttcagatggaaatttgttagatgctctaggtgctgccatcaag
gctgctttgagcaacaccggtattccgaaagttcaaattgctgctggtgcatcaagtgat
gagaaaccagaagttgaagtaagtgacgaggagtttctgcagtttgacacatctggagtc
cctgttatagttacattgactaaggttgggaagcactatattgtggatgccacatctgaa
gaagaatcacaaatgagctctgccgtttctatctctattaatagacaagggtacatatgt
ggtgtaaccaaacgaggaggcatggggctcgatccaagtgtcattcttgatatggtatcc
gtggctaagcttgtaagcgagcagttaataaacaaattggattcagaaatagcttctgct
gaagctgaagatgagtcataa
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