Cicer arietinum (chickpea): 101499554
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Entry
101499554 CDS
T02819
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
cam
Cicer arietinum (chickpea)
Brite
KEGG Orthology (KO) [BR:
cam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cam03021
]
101499554 (SUPT6H)
03036 Chromosome and associated proteins [BR:
cam03036
]
101499554 (SUPT6H)
Transcription machinery [BR:
cam03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101499554 (SUPT6H)
Chromosome and associated proteins [BR:
cam03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101499554 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
SPT6_acidic
YqgF
Spt6_S1
HHH_9
HTH_44
HHH_3
Motif
Other DBs
NCBI-GeneID:
101499554
NCBI-ProteinID:
XP_004493314
UniProt:
A0A1S2XSL1
LinkDB
All DBs
Position
Ca3:complement(27885140..27895441)
Genome browser
AA seq
1639 aa
AA seq
DB search
MAKGVISDEEDDVELDMDEREPVDGDDLEEGRDMDDDDEDEEEEGQDEYEKDGFIVDDIE
EEEEQDEEERAESDEERQKKKKRKKKEEYVLDEDDYELLEDNNINIHRRKESKKFKRLKK
GQRDTEEGHYGQSDEEEFFGSGKVGRTAEEKLKRSLFGDDEGTHLEDIAEEEDQGEEEED
ADIGEEDEMADFIVDEEEVDENGAPVRYKKPKGVKRPRQAPGVSSSALQEAQELFGDVDE
LLEARNQSRELNDYRETRLEDEFEPIVLAEKYMTPKDDRIRELDIPERMQITEESTGAPS
LDGSIDEESQWIVSQLKNGAVPWIRKKDSSSQNNAEELPIDKDDIVRFLELYHVQKLDIP
FISMYRKEECLSLLKDLERPEAGDETWDKNNKTPTLKWHKILWALQDLDRKWLLLQKRKS
ALQLYYNKRFEEESRRVYDETRLNLNRQLFESVMRSLKEAESEREVDDVDSKFNLHFPPG
EAGVDEGQYKRPKRKSMYSSFSKAGLWEVASRFGCSSEQLGLCLSLVQLQELEDPKETPE
EVASNFTCAMYDTPEEVLKCARHMAAVEISCEPSIKKHVRSHFIDHAVVSTCPTADGNIT
IDSFHQFFGVKWLREKPLSKFEDAQWLLIQKAEEEKLIQVTIKLPEEYLNKLIDQFNEYY
VSDSVSRSAQLWNEQRKLILHDAIFRFLLPSMEKEARGVLASKAKHWLLMEYGKALWSKV
SVGPYQQKENDLSSDDEAAPRVMACSWGPGKPQTTFVMLDSSGEVQDVLYTGSLTLRSQS
ASDQQRKKNDQERVLKFMTDHQPHVVVLGAVNLSCTRLKEDIYEVIFKMVEENPRDVGHE
MDGLSIVYGDESLPRLYENSRISSEQLPSQQLGIVRRAVALGRYLQNPLAMVATLCGPRK
EILSWKLSPLESFLNPDDKFGMVEQVMVDVTNQVGLDINLAISHEWLFAPLQFISGLGPR
KAAFLQRSLVRAGAIFTRKDFLTEHKLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDT
RIHPESYILAQELAKDVYEEDGTGDANDDDDALEMAIEHVRDRPSYLKNLDVEEYAAGKE
RQDKIETFYDIKRELIQGFQDWRKQYEEPSQDEEFYMISGETEETLAEGKMVQVTVRRLQ
AQKAICGLESGMTGILMKEDYTDDWRDIIELSDRLHEGDMLTCKIKSIQKNRYQVFLVCK
DSEMRRDRLQNNHDLDPYYHEDRSCLQSEQDKTRKEKELAKKHFKPRMIVHPRFQNITAD
EAMEYLSDKDPGESIFRPSSRGPSYLTLTLKIHDGVYAHKDIVEGGKEKKDIASLLRIGK
TLKIGEDTFEDLDEVMDRYVDPLVTHLKTMLNYRKFKKGSKTEVDELLRIEKAEYPMRIV
YSFGISHEHPGTFILTFIRSTNPHHEYIGLYPKGFRFRKKMFEDIDRLVSYFQRHIDDPQ
NDSTPSIRSVAAMVPMRSPATGGSSGASVGSGWGGSNSEGGWRGHSHDRDRSSTPGSRTG
RSDYRNNGNRDEHPSGVPRPYGGGRGRGRGSYNNSSRGHNSNSERQDSGYGTTRWGSAPK
DGDDGLSNFPGAKVQNSPGREAFPGGWGGGGASTSDSNAGWGRGSGGAGPSDAEHGNSGW
GTGSKRNSDNGWSGGSSGR
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaggcgtaatatctgacgaagaagatgacgttgaactcgatatggatgagagg
gagcccgttgacggcgatgatttggaagaaggtcgcgatatggatgacgatgatgaggac
gaagaagaggaagggcaggatgaatatgaaaaggatggatttatagttgatgacattgag
gaagaagaggagcaggatgaagaagagagagcagagagtgatgaagagcgtcagaagaag
aagaagaggaagaaaaaggaggagtatgtccttgatgaggatgattacgagttgctggag
gacaataatatcaatattcatcgtcgaaaggagagcaaaaagttcaagcgactgaaaaag
ggccagagggatactgaggaggggcactatggacaatctgatgaagaggagttttttgga
agtggtaaagttgggcgaactgctgaggagaagcttaaacgcagtttatttggcgatgat
gaaggaactcatctcgaagacattgctgaagaggaggatcaaggagaagaagaggaagat
gctgacattggagaagaagatgaaatggccgacttcattgtggatgaagaagaagttgat
gagaacggagctcctgtgaggtacaagaagccgaagggggtcaaaaggcctaggcaggca
ccaggagtctcgtcctcagctttacaagaagctcaagaattatttggcgatgttgatgag
ttgcttgaggctcgcaatcaaagtcgagaattgaatgactatagagagactagacttgaa
gatgaatttgagcctattgttctcgctgagaaatatatgacaccgaaggatgaccggatt
agggagctcgatattccagagagaatgcagataacggaggagagtactggtgccccttca
ctggatggtagtatagatgaagagagtcagtggatagttagtcaacttaaaaatggagca
gttccttggattcgcaagaaagattcaagctcccaaaataatgcggaggagctaccaatt
gacaaggatgatatcgtcagatttttggaactgtatcatgtgcaaaaattagatattcct
tttatttccatgtaccgaaaggaagagtgtttaagcttattgaaagaccttgagcggcct
gaagctggtgacgagacttgggataagaataacaagacacctactctaaaatggcacaag
atactgtgggctctacaggacctggacaggaagtggttacttcttcagaagcggaagagt
gccctccaattatactacaataaacggtttgaagaagagtctcgtcgcgtctatgatgaa
acaagactaaacttgaataggcaattgtttgaatcagttatgagatcactgaaggaggca
gaatcagagagggaggttgatgatgttgactccaaattcaacttgcatttcccaccaggt
gaagctggtgttgatgaaggacaatacaaaaggccaaaacggaagtcaatgtatagctct
ttcagcaaggcaggtctgtgggaggttgcaagcaggtttgggtgtagttctgagcaactc
ggattatgtctatctctagttcagctgcaagaattggaagatccaaaggaaacaccagaa
gaggtggcttctaacttcacatgtgctatgtatgatactcctgaagaagtacttaagtgt
gctagacacatggcagctgttgagataagttgtgagcctagcataaagaaacatgttaga
agtcactttattgaccatgctgtggtgtcaacctgccctactgctgatggaaatataacc
atagattcgttccatcagttttttggggtgaagtggctgcgagagaagcctttgtctaaa
tttgaggatgcccaatggctccttatacagaaggcagaagaggaaaaactcattcaagtt
actattaagcttcctgaagagtatctaaataaattaatagaccaattcaatgagtattac
gttagtgatagtgttagcagatctgctcaactgtggaatgaacagaggaagctgatattg
catgatgcaatctttcgatttcttttaccatcaatggaaaaagaagcaagaggcgtctta
gcaagcaaagcaaagcattggttacttatggagtatggaaaggccttgtggagtaaggtt
tctgtggggccttatcaacagaaggaaaatgatctaagctcagatgatgaggctgctcct
agggttatggcctgctcttggggccctggaaagccacaaacaacttttgttatgttagat
tcatctggagaagtgcaagatgtgctatacactgggtcacttactttaaggtcacaaagc
gccagtgaccaacaaaggaagaagaatgaccaggaacgtgtgttgaagtttatgacagat
caccaaccacatgttgttgttttaggagcagttaacttgtcttgcactcgtttgaaggaa
gatatatacgaggttattttcaagatggtcgaggaaaaccctagagatgttgggcatgaa
atggatgggctcagcattgtttatggggatgaatctttgcctcgtctttatgaaaattct
cgaatttcctctgaacagcttccttcacagcagctaggtattgtgaggcgggctgttgcg
cttggtcgatatctccagaacccattggcaatggttgcgacattgtgtggacccagaaag
gaaatactatcatggaaactgagccctttggagagttttctcaacccagatgataaattt
gggatggttgagcaggttatggtagatgtgaccaatcaggtcggcttagacatcaattta
gcaataagtcatgaatggttatttgctccattacaatttatttcggggcttggtccacgg
aaagctgcgttcttgcagagatcgctggtaagagctggtgcaatttttactcggaaagat
tttttgactgaacataaacttggtaaaaaagtgtttgtcaacgcggttggtttcttgcgt
gtccggcgaagtggattggccgctagcagcagccaatttattgatttgctggatgataca
cgaattcatccagaatcttatattcttgcccaggagttggccaaagatgtgtatgaggaa
gatggcacaggtgatgcaaatgatgatgatgatgcactggagatggccatagaacatgtc
agagatcgacctagttatttgaaaaacctggatgttgaggaatatgctgctggcaaagag
cgtcaagacaaaattgaaactttctatgatataaaaagagaattgattcaaggttttcag
gattggcgtaagcaatatgaagaaccaagtcaggatgaggagttttatatgatttccggt
gagactgaagagactcttgctgaaggtaaaatggtccaagtaacagttcgcagactgcaa
gcccaaaaggcaatatgtgggcttgaatcaggaatgactggaatccttatgaaagaagac
tatactgatgactggagagatataatagaattatctgataggctacatgaaggtgacatg
ctcacttgtaaaatcaagtcaatccaaaagaacaggtatcaagtcttccttgtttgtaaa
gatagtgaaatgagacgtgatcggttgcagaacaaccatgatcttgatccatattaccac
gaagatcggagctgcttacagagtgagcaagacaaaactcggaaagaaaaggagcttgca
aagaagcatttcaagccaaggatgattgttcatccacgctttcagaacataactgcagat
gaagcaatggagtatttgtcggacaaggatcctggagaaagtattttccgtcctagttcc
cgtggtccttcataccttactttgactcttaaaattcacgatggagtatatgcccacaag
gatatagttgaaggtgggaaggaaaaaaaggacatcgcaagcttacttcgaatcggaaag
acactaaaaattggagaggacacttttgaagatttagatgaggttatggatcgttatgtt
gatcccttggtgactcacttaaaaacaatgttaaactatcgcaagttcaagaagggttca
aaaacagaagttgatgaacttttgaggattgaaaaggctgagtatcccatgcgcatagtc
tatagttttggcatctctcatgaacatcctggcacatttatattgacttttataagaagt
acaaatcctcaccacgagtacattggtctttaccccaaaggattcaggttccgcaaaaag
atgtttgaggatattgaccggcttgtgtcatattttcaaaggcacattgacgatccacaa
aatgattcaacaccttccattagatctgtagctgcaatggtaccaatgcgaagccctgca
actggtggctcatcaggggcatctgtgggtagtggctggggtggttcaaacagcgagggt
ggctggagaggtcactcgcatgatagagatcgatcttctactcctggttccaggacagga
cggtctgattacagaaacaatgggaatcgagatgaacaccctagtggagtgcctcgtcct
tatggtggtggacgaggccgtggtcgtggttcttataacaatagcagtagaggacacaac
tcaaacagtgaaaggcaggactctggttacggtacaaccagatggggatccgccccgaaa
gatggggatgatggtttaagcaattttccaggggctaaggttcaaaattcccctggaagg
gaagcatttcctggtggttggggtggagggggagctagtactagtgacagcaacgctggc
tggggacgtgggagtggtggtgctggtccgagcgatgctgaacatggaaactctggatgg
ggaactggatccaagagaaattccgacaatgggtggtctggtggaagctctggtcggtga
DBGET
integrated database retrieval system
