KEGG   Cicer arietinum (chickpea): 101511529
Entry
101511529         CDS       T02819                                 
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
cam  Cicer arietinum (chickpea)
Pathway
cam03018  RNA degradation
cam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101511529
  09123 Folding, sorting and degradation
   03018 RNA degradation
    101511529
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cam03019]
    101511529
   03041 Spliceosome [BR:cam03041]
    101511529
Messenger RNA biogenesis [BR:cam03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101511529
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     101511529
Spliceosome [BR:cam03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    101511529
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 101511529
NCBI-ProteinID: XP_004494370
UniProt: A0A1S2XTM5
LinkDB
Position
Ca3:36436065..36439847
AA seq 150 aa
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGREDSAGGRQPKGVGRGFDD
GSAKGPGGRGRGGQGGKPGGSRGAGGRGRG
NT seq 453 nt   +upstreamnt  +downstreamnt
atgcttcctctatctcttcttaagactgcacaaggccaccctatgttggtggagctgaaa
aatggagagacttataatgggcatttggttaattgcgatacatggatgaacatccatctt
cgagaagtcatttgtacctctaaagatggagatagattttggcggatgccagaatgctat
atacgggggaatacaattaagtatcttcgagttcccgatgaggtaattgacaaagttcaa
gaagaaaccaagagccgtacagatcgcaagccacctggtgtgggacgtgggaggggaaga
ggtagggaggacagtgctggtggacgccaaccaaaaggagttgggcgtggttttgatgat
ggcagtgctaagggacctggaggccgaggcaggggtggacaaggtggaaagcctggtgga
agtagaggtgctggtgggagaggtagaggttga

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